iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098875

UUCD1 version

UUC-PoT-01702

Ensembl Protein ID

POPTR_0001s40500.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s40500	POPTR_0001s40500.1	POPTR_0001s40500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.90e-79	267.8	28	337

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenp..kepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           GlkNlgN+CY+NSvLQcL+ +p+l++++l+ ++++ +n  ++   +++ +++   ++++++l +s+  +  p+++ ++lk +ae+f+  +q
   Q: 28   GLKNLGNSCYLNSVLQCLTYTPPLANFCLRlQHSSLCNSLASgdRKRDCPFCILEKQIVRSL-SSDLAHDVPSKIRSCLKIFAEHFRCGRQ 117
           9*****************************76666666655522456668999999999999.999999********************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknk.slisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           +Da+Efl++++d+ ++++                 +l++ +++  ++ ++ s+++++F+g l+sq+kcl c+ +s++ ++ +d+sl+v ++
   Q: 118  EDAHEFLRYVIDACHNTC----------------LRLKKLSWKGIENGGDgSVVKKIFGGALQSQVKCLCCNCESNKVDEIMDISLDVLNS 192
           ******************................346677899999998889*************************************** PP
   S: 180  eetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspee 270
           +     s++d++++f+++e l+g+nky+ce+ckk++ a+k++++ + P+vL+++LkRf    e+ +  ki+k + f + L ls+f++++++
   Q: 193  N-----SVRDAMQKFFQPEVLDGNNKYKCENCKKLVAARKQMSVLQAPNVLVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMSKTSQ 274
           *.....9***************************************************....778999*********99*********666 PP
   S: 271  kqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +   + kY+L++++vHsG sl+ GHY+ay+k+  g+W++++Ds+Vt ++ +ev +   ++aY+lf+ r
   Q: 275  DP--QPKYNLFGIIVHSGySLEAGHYYAYIKDAIGQWYCCNDSYVTLSTLQEVMS---EKAYILFFSR 337
           65..9**************************************************...*******987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGFQLQKLQ MSWQPNLLSQ QRKNGPLGLK NLGNSCYLNS VLQCLTYTPP LANFCLRLQH 60
SSLCNSLASG DRKRDCPFCI LEKQIVRSLS SDLAHDVPSK IRSCLKIFAE HFRCGRQEDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTCGGG ATTGGTGATC TTCGTGTGAT GCTGCCTCTG CTGCTGCTGC AGCTTCCTCC 60
CTTTAAAAAA ATGCTTCCAT TTTTAATTCC TACCTTTCAC AATTAATAAT TAATCCCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001017	Aegilops tauschii	57.28	2.00e-102	366.00
IUUC-Atr-002832	Amborella trichopoda	52.69	2.00e-142	498.00
IUUC-Aly-005983	Arabidopsis lyrata	54.77	0.00e+00	659.00
IUUC-Ath-006707	Arabidopsis thaliana	54.31	0.00e+00	657.00
IUUC-Bdi-014044	Brachypodium distachyon	44.20	1.00e-122	432.00
IUUC-Bol-016356	Brassica oleracea	50.73	5.00e-172	597.00
IUUC-Bra-018096	Brassica rapa	51.46	3.00e-168	584.00
IUUC-Dme-032119	Drosophila melanogaster	35.71	3.00e-49	190.00
IUUC-Gma-043410	Glycine max	60.99	0.00e+00	720.00
IUUC-Hvu-047673	Hordeum vulgare	57.98	6.00e-77	281.00
IUUC-Lpe-050888	Leersia perrieri	57.18	4.00e-111	395.00
IUUC-Mtr-058396	Medicago truncatula	58.61	0.00e+00	679.00
IUUC-Mvi-060547	Microbotryum violaceum	39.30	1.00e-61	231.00
IUUC-Mac-065596	Musa acuminata	49.69	7.00e-142	496.00
IUUC-Oba-075223	Oryza barthii	60.24	3.00e-113	402.00
IUUC-Obr-076589	Oryza brachyantha	59.79	5.00e-97	347.00
IUUC-Ogl-077769	Oryza glaberrima	60.24	3.00e-113	402.00
IUUC-Ogu-078416	Oryza glumaepatula	59.65	1.00e-97	350.00
IUUC-Oin-079451	Oryza indica	60.55	2.00e-114	406.00
IUUC-Olo-080569	Oryza longistaminata	60.55	1.00e-114	406.00
IUUC-Ome-081320	Oryza meridionalis	56.49	6.00e-98	350.00
IUUC-Oni-082823	Oryza nivara	59.65	9.00e-98	350.00
IUUC-Opu-083432	Oryza punctata	55.78	2.00e-93	335.00
IUUC-Oru-084652	Oryza rufipogon	53.33	2.00e-82	299.00
IUUC-Osa-085846	Oryza sativa	60.55	1.00e-114	406.00
IUUC-Ppa-095241	Physcomitrella patens	54.76	7.00e-114	404.00
IUUC-Ppe-101980	Prunus persica	72.46	7.00e-175	606.00
IUUC-Smo-108788	Selaginella moellendorffii	58.39	2.00e-108	384.00
IUUC-Sit-109696	Setaria italica	43.51	6.00e-121	427.00
IUUC-Sly-111085	Solanum lycopersicum	72.21	6.00e-141	494.00
IUUC-Stu-111972	Solanum tuberosum	52.31	9.00e-151	526.00
IUUC-Sbi-114319	Sorghum bicolor	59.00	7.00e-111	394.00
IUUC-Tca-121693	Theobroma cacao	61.82	2.00e-178	619.00
IUUC-Tae-125372	Triticum aestivum	57.03	4.00e-119	421.00
IUUC-Tur-126469	Triticum urartu	55.82	6.00e-103	367.00
IUUC-Vvi-131135	Vitis vinifera	63.27	0.00e+00	763.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence