iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114339

UUCD1 version

UUC-SoB-01368

Ensembl Protein ID

Sb09g023380.1

UniProt Accession

A0A1B6P990; A0A1B6P990_SORBI

Genbank Protein ID

KXG22216.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G173300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g023380	Sb09g023380.1	Sb09g023380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.30e-31	108.0	274	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +f+CpIslelM dPvv++sG+tydr sI +w+ sg++tcP+t+q l + +lvPn++l++li++wc en++
   Q: 274  PPLDFRCPISLELMADPVVASSGQTYDRDSITRWFGSGKSTCPKTGQVLPNLELVPNKALKNLISRWCRENGI 346
           6789******************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASGATSDAW PSSPYSSSAP DGEVLRSLHR LARDLSAAEA PAPFLRAVFA AVARRARLLA 60
AVFDDLLLCG AAAGPLLLLP RSASLCLREL LLVLQRFKAL VADCAARSRT RLLLQSDEVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTAGCG GCGCGACGAG CGACGCGTGG CCATCCTCCC CCTACTCCTC GTCGGCGCCC 60
GACGGGGAGG TCCTACGCTC CCTGCACCGC CTGGCGCGGG ACCTGTCTGC AGCCGAGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043531	Glycine max	44.41	1.00e-99	356.00
IUUC-Hvu-047557	Hordeum vulgare	80.42	0.00e+00	710.00
IUUC-Lpe-051445	Leersia perrieri	77.78	0.00e+00	714.00
IUUC-Oba-075591	Oryza barthii	78.96	0.00e+00	682.00
IUUC-Ogl-077709	Oryza glaberrima	78.96	0.00e+00	682.00
IUUC-Ogu-078626	Oryza glumaepatula	78.96	0.00e+00	683.00
IUUC-Oin-080113	Oryza indica	78.81	0.00e+00	682.00
IUUC-Olo-080301	Oryza longistaminata	76.06	2.00e-136	478.00
IUUC-Ome-081924	Oryza meridionalis	78.88	0.00e+00	685.00
IUUC-Oni-082284	Oryza nivara	78.81	0.00e+00	680.00
IUUC-Oru-084898	Oryza rufipogon	78.81	0.00e+00	723.00
IUUC-Sit-110788	Setaria italica	85.42	0.00e+00	744.00
IUUC-Tae-124205	Triticum aestivum	79.32	0.00e+00	637.00
IUUC-Tur-126373	Triticum urartu	61.01	2.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence