iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114296

Ensembl Protein ID

Sb08g020590.1

UniProt Accession

C5YRE3; C5YRE3_SORBI

Genbank Protein ID

EES16315.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G157000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g020590	Sb08g020590.1	Sb08g020590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.20e-17	62.6	144	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt...........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           ++vkvs++g+++++++dl+ + ++++L++a+++  l+           +++ s++a++YeD+dGDl+ l++D+++d+++s       ++rl+i+k
   Q: 144  LFVKVSMDGAPYLRKVDLKMYKGYRELREALEAmfLCfsgsggsadapAVNPSDFAVTYEDKDGDLM-LVGDVPFDMFIS------TCKRLRIMK 231
           68*******************************7644889999999999999***************.************......9******98 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEVAAASAAA SFGLKAADDV DNLRATELRL GLPGTEEEPQ QVHKATAAAA AVELPLLPAA 60
TTPPAPSTPR GKKRDVVGSG NEDAPKKRDG NADAAPPAAK AQVVGWPPVR SYRKSCFQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAGCGACA CCCACCACCA CCACCACCAG CAGCTACCGA CGACGACCGA GCACAGCCAG 60
GCAGCGCAGG CGCAGGCGCA GCGCAGCTCG TCGGATTCAA TTCGTTCTTG AGCCAAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_08g020590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014020	Brachypodium distachyon	60.78	9.00e-57	211.00
IUUC-Fal-037105	Ficedula albicollis	38.24	9.20e-01	26.90
IUUC-Hvu-047853	Hordeum vulgare	60.76	8.00e-59	218.00
IUUC-Nle-069356	Nomascus leucogenys	36.51	5.10e-01	28.10
IUUC-Oba-075141	Oryza barthii	61.30	1.00e-57	214.00
IUUC-Ogu-078093	Oryza glumaepatula	62.61	3.00e-60	223.00
IUUC-Oin-079780	Oryza indica	60.87	5.00e-57	212.00
IUUC-Oni-083078	Oryza nivara	60.87	5.00e-57	212.00
IUUC-Oru-084991	Oryza rufipogon	60.87	5.00e-57	212.00
IUUC-Osa-085321	Oryza sativa	60.87	5.00e-57	212.00
IUUC-Ppe-101534	Prunus persica	47.09	2.00e-43	167.00
IUUC-Sja-107728	Schizosaccharomyces japonicus	31.25	2.30e+00	26.90
IUUC-Sit-109841	Setaria italica	66.38	1.00e-69	254.00
IUUC-Tae-123807	Triticum aestivum	59.75	6.00e-59	219.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence