iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007139

UUCD1 version

UUC-ArT-00153

Ensembl Protein ID

AT2G40770.3

UniProt Accession

F4II36; F4II36_ARATH

Genbank Protein ID

AEC09876.1; ANM63065.1; ANM63066.1

Protein Name

RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein

Genbank Nucleotide ID

CP002685; CP002685; CP002685

Gene Name

At2g40770; T7D17.5; T7D17_5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G40770	AT2G40770.3	AT2G40770.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	32.96	1.00e-146	519.00	IUUC-Hsa-046172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGRRKQSKPQ RAVGLITPTG SESDRNQLPG DEAEGSGDKN VEDIDKPYYV NICLSSRVSE 60
QQQNFDLAEV VLTNFSVRER VGSSSTFTKP IEVDHDLDCS LRFRLCNVTN FVDRIKLGHW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTAGGA GAAAGCAATC CAAGCCCCAG CGTGCAGTGG GTTTGATCAC TCCAACTGGT 60
TCTGAATCCG ATAGAAATCA ATTACCCGGC GACGAAGCTG AGGGTTCAGG GGACAAGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50293--TPR_REGION
PS01359--ZF_PHD_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002896	Amborella trichopoda	52.04	0.00e+00	1550.00
IUUC-Apl-003428	Anas platyrhynchos	33.22	1.00e-153	537.00
IUUC-Aca-004510	Anolis carolinensis	33.56	3.00e-143	503.00
IUUC-Aly-005691	Arabidopsis lyrata	93.16	0.00e+00	3049.00
IUUC-Afu-008890	Aspergillus fumigatus	33.45	1.00e-30	128.00
IUUC-Ani-009351	Aspergillus nidulans	30.50	7.00e-30	126.00
IUUC-Ang-009583	Aspergillus niger	33.12	2.00e-33	137.00
IUUC-Aor-009893	Aspergillus oryzae	37.55	1.00e-31	132.00
IUUC-Ate-010385	Aspergillus terreus	34.72	2.00e-39	157.00
IUUC-Ame-011882	Astyanax mexicanus	33.20	1.00e-153	537.00
IUUC-Bgr-012295	Blumeria graminis	29.41	2.00e-32	134.00
IUUC-Bta-012528	Bos taurus	32.21	3.00e-151	529.00
IUUC-Bci-013701	Botrytis cinerea	38.33	4.00e-35	143.00
IUUC-Bdi-014034	Brachypodium distachyon	47.74	0.00e+00	1370.00
IUUC-Bol-015555	Brassica oleracea	75.00	0.00e+00	2411.00
IUUC-Bra-016916	Brassica rapa	78.10	0.00e+00	2472.00
IUUC-Cja-019391	Callithrix jacchus	32.56	8.00e-152	531.00
IUUC-Cfa-020732	Canis familiaris	32.90	1.00e-153	537.00
IUUC-Cpo-021641	Cavia porcellus	32.80	6.00e-152	531.00
IUUC-Csa-023937	Chlorocebus sabaeus	33.44	6.00e-154	538.00
IUUC-Cho-024617	Choloepus hoffmanni	42.93	8.00e-38	152.00
IUUC-Cgl-026624	Colletotrichum gloeosporioides	28.96	1.00e-36	148.00
IUUC-Cme-027178	Cyanidioschyzon merolae	32.83	1.00e-85	311.00
IUUC-Dre-028441	Danio rerio	33.17	4.00e-158	552.00
IUUC-Dno-029395	Dasypus novemcinctus	32.25	4.00e-148	519.00
IUUC-Dse-031372	Dothistroma septosporum	31.09	6.00e-42	166.00
IUUC-Dme-031785	Drosophila melanogaster	30.18	1.00e-55	211.00
IUUC-Ete-032502	Echinops telfairi	42.93	2.00e-79	290.00
IUUC-Eca-033455	Equus caballus	29.97	2.00e-123	437.00
IUUC-Eeu-034956	Erinaceus europaeus	30.57	4.00e-129	456.00
IUUC-Fca-035984	Felis catus	41.63	5.00e-96	345.00
IUUC-Fal-036811	Ficedula albicollis	32.98	2.00e-152	533.00
IUUC-Fso-038224	Fusarium solani	34.04	2.00e-38	154.00
IUUC-Gmo-039126	Gadus morhua	34.15	8.00e-158	551.00
IUUC-Ggr-040102	Gaeumannomyces graminis	29.25	7.00e-31	129.00
IUUC-Gga-041238	Gallus gallus	33.39	2.00e-157	550.00
IUUC-Gac-041614	Gasterosteus aculeatus	33.08	3.00e-153	536.00
IUUC-Gma-043259	Glycine max	58.51	0.00e+00	1835.00
IUUC-Ggo-045213	Gorilla gorilla	31.83	1.00e-144	507.00
IUUC-Hsa-046172	Homo sapiens	33.12	1.00e-151	530.00
IUUC-Hvu-047286	Hordeum vulgare	44.98	9.00e-106	376.00
IUUC-Itr-048880	Ictidomys tridecemlineatus	33.25	3.00e-155	542.00
IUUC-Kpa-049196	Komagataella pastoris	30.04	2.00e-30	128.00
IUUC-Lch-050648	Latimeria chalumnae	31.23	4.00e-124	439.00
IUUC-Lpe-050871	Leersia perrieri	48.10	0.00e+00	1372.00
IUUC-Loc-051862	Lepisosteus oculatus	32.71	5.00e-151	528.00
IUUC-Lma-053266	Leptosphaeria maculans	30.22	2.00e-33	137.00
IUUC-Laf-053851	Loxodonta africana	32.82	3.00e-149	522.00
IUUC-Mcc-055066	Macaca mulatta	33.36	2.00e-153	536.00
IUUC-Meu-056104	Macropus eugenii	38.72	2.00e-59	224.00
IUUC-Mor-057226	Magnaporthe oryzae	30.34	6.00e-34	139.00
IUUC-Mpo-057528	Magnaporthe poae	29.53	2.00e-28	121.00
IUUC-Mtr-058336	Medicago truncatula	57.55	0.00e+00	1736.00
IUUC-Mga-059775	Meleagris gallopavo	33.39	1.00e-156	547.00
IUUC-Mvi-060213	Microbotryum violaceum	31.52	6.00e-30	127.00
IUUC-Mdo-062943	Monodelphis domestica	33.96	3.00e-160	559.00
IUUC-Mmu-064115	Mus musculus	32.83	5.00e-153	535.00
IUUC-Mac-064445	Musa acuminata	53.48	0.00e+00	719.00
IUUC-Mpu-066850	Mustela putorius furo	32.90	2.00e-153	536.00
IUUC-Mlu-067610	Myotis lucifugus	32.93	2.00e-149	523.00
IUUC-Nfi-068264	Neosartorya fischeri	34.14	2.00e-32	134.00
IUUC-Ncr-068745	Neurospora crassa	30.75	1.00e-35	145.00
IUUC-Nle-070055	Nomascus leucogenys	33.20	3.00e-152	533.00
IUUC-Ont-071526	Oreochromis niloticus	33.39	3.00e-153	535.00
IUUC-Oan-073609	Ornithorhynchus anatinus	31.70	2.00e-97	349.00
IUUC-Ocu-074042	Oryctolagus cuniculus	32.98	3.00e-153	536.00
IUUC-Oba-075121	Oryza barthii	47.85	0.00e+00	1354.00
IUUC-Obr-076312	Oryza brachyantha	47.83	0.00e+00	1405.00
IUUC-Ogl-077560	Oryza glaberrima	47.60	0.00e+00	1344.00
IUUC-Ogu-078746	Oryza glumaepatula	46.90	0.00e+00	1280.00
IUUC-Oin-080153	Oryza indica	48.42	0.00e+00	929.00
IUUC-Olo-080436	Oryza longistaminata	48.05	0.00e+00	1318.00
IUUC-Oni-082845	Oryza nivara	47.40	0.00e+00	1345.00
IUUC-Opu-083321	Oryza punctata	47.46	0.00e+00	1325.00
IUUC-Oru-084329	Oryza rufipogon	48.02	0.00e+00	1368.00
IUUC-Osa-085508	Oryza sativa	59.53	8.00e-67	245.00
IUUC-Olu-087671	Ostreococcus lucimarinus	29.74	3.00e-159	555.00
IUUC-Oar-090005	Ovis aries	32.41	7.00e-152	531.00
IUUC-Pan-092723	Papio anubis	32.36	6.00e-138	485.00
IUUC-Psi-093870	Pelodiscus sinensis	33.71	3.00e-156	546.00
IUUC-Pma-094750	Petromyzon marinus	40.59	4.00e-46	177.00
IUUC-Pno-095005	Phaeosphaeria nodorum	31.32	4.00e-38	153.00
IUUC-Ppa-095619	Physcomitrella patens	35.19	0.00e+00	684.00
IUUC-Pfo-096833	Poecilia formosa	33.73	4.00e-154	539.00
IUUC-Pab-098544	Pongo abelii	32.94	3.00e-152	533.00
IUUC-Pop-099540	Populus trichocarpa	59.22	0.00e+00	1481.00
IUUC-Ppe-102038	Prunus persica	58.34	0.00e+00	1914.00
IUUC-Pte-104081	Pyrenophora teres	31.71	2.00e-38	154.00
IUUC-Pyt-104477	Pyrenophora triticirepentis	30.86	3.00e-38	154.00
IUUC-Rno-104959	Rattus norvegicus	32.40	2.00e-152	533.00
IUUC-Sha-107078	Sarcophilus harrisii	33.63	2.00e-158	553.00
IUUC-Sja-107755	Schizosaccharomyces japonicus	29.18	2.00e-34	141.00
IUUC-Spo-108132	Schizosaccharomyces pombe	30.68	5.00e-38	153.00
IUUC-Smo-108991	Selaginella moellendorffii	39.13	0.00e+00	904.00
IUUC-Sit-110047	Setaria italica	46.93	0.00e+00	737.00
IUUC-Sly-111232	Solanum lycopersicum	54.33	0.00e+00	1104.00
IUUC-Sar-113738	Sorex araneus	41.27	4.00e-93	336.00
IUUC-Sbi-114485	Sorghum bicolor	46.65	0.00e+00	762.00
IUUC-Sre-115189	Sporisorium reilianum	29.32	4.00e-26	114.00
IUUC-Ssc-116362	Sus scrofa	32.98	1.00e-153	537.00
IUUC-Tgu-117188	Taeniopygia guttata	32.83	7.00e-153	535.00
IUUC-Tru-117637	Takifugu rubripes	33.16	3.00e-151	529.00
IUUC-Tni-119701	Tetraodon nigroviridis	32.95	7.00e-152	531.00
IUUC-Tca-121831	Theobroma cacao	60.05	0.00e+00	1927.00
IUUC-Tre-122005	Trichoderma reesei	32.69	2.00e-31	130.00
IUUC-Tvi-122328	Trichoderma virens	32.13	6.00e-32	132.00
IUUC-Tae-123569	Triticum aestivum	49.09	0.00e+00	1349.00
IUUC-Tur-125964	Triticum urartu	49.41	0.00e+00	1299.00
IUUC-Tbe-127799	Tupaia belangeri	33.49	2.00e-46	181.00
IUUC-Uma-129442	Ustilago maydis	26.18	1.00e-25	112.00
IUUC-Vvi-131682	Vitis vinifera	55.92	0.00e+00	1795.00
IUUC-Xtr-132232	Xenopus tropicalis	31.05	3.00e-122	433.00
IUUC-Xma-133291	Xiphophorus maculatus	33.62	3.00e-148	519.00
IUUC-Yli-134508	Yarrowia lipolytica	28.04	5.00e-23	103.00
IUUC-Zma-135327	Zea mays	49.71	0.00e+00	889.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence