iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114188

UUCD1 version

UUC-SoB-00474

Ensembl Protein ID

Sb02g023630.1

UniProt Accession

A0A1B6QCA8; A0A1B6QCA8_SORBI

Genbank Protein ID

KXG35540.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G188700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g023630	Sb02g023630.1	Sb02g023630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-25	89.7	297	368

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           pe + CpI+l+lM+dPv++++G+tydr+sI +w++ g  tcPvt+++l+  d+vPn +lr +i++ + +n++
   Q: 297  PETLQCPITLDLMTDPVTVSTGQTYDRESITRWIKAGCCTCPVTGERLRTADVVPNAALRGIIERMLLSNGV 368
           8999************************************************************99888875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPPPPPTGEP KRRRLLSLMA VYPSESIAPA PVFSSLLALA ADLSSQGFGA DAGAFPVLRR 60
GLRQAVRIAG LLLAFLEEIQ DVTATKTAAL PSSAVLGLTE LHVAMQKLRF LLSDCARRGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCCGC CTCCGCCAAC GGGCGAGCCG AAGCGCCGCC GCCTGCTATC CCTCATGGCA 60
GTCTACCCAA GCGAGAGCAT CGCGCCGGCG CCTGTGTTCA GCTCGCTTCT CGCGCTTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	69.38	7.00e-176	608.00
IUUC-Atr-002640	Amborella trichopoda	32.83	4.00e-81	295.00
IUUC-Aly-006337	Arabidopsis lyrata	36.42	3.00e-105	374.00
IUUC-Ath-007598	Arabidopsis thaliana	35.01	5.00e-102	364.00
IUUC-Bdi-014095	Brachypodium distachyon	70.44	0.00e+00	838.00
IUUC-Bol-015964	Brassica oleracea	35.51	2.00e-100	359.00
IUUC-Bra-017789	Brassica rapa	35.08	7.00e-96	343.00
IUUC-Gma-043325	Glycine max	39.77	1.00e-107	383.00
IUUC-Hvu-047204	Hordeum vulgare	70.45	0.00e+00	858.00
IUUC-Lpe-051010	Leersia perrieri	69.57	0.00e+00	683.00
IUUC-Mtr-058647	Medicago truncatula	35.02	9.00e-110	390.00
IUUC-Mla-058845	Melampsora laricipopulina	32.94	6.00e-03	33.50
IUUC-Mac-064527	Musa acuminata	49.60	1.00e-85	310.00
IUUC-Obr-076695	Oryza brachyantha	70.60	2.00e-151	528.00
IUUC-Ogl-076995	Oryza glaberrima	72.62	0.00e+00	724.00
IUUC-Ogu-078633	Oryza glumaepatula	59.66	4.00e-174	603.00
IUUC-Oin-079752	Oryza indica	71.18	0.00e+00	730.00
IUUC-Ome-081268	Oryza meridionalis	71.25	0.00e+00	752.00
IUUC-Oni-082928	Oryza nivara	72.62	0.00e+00	722.00
IUUC-Opu-084107	Oryza punctata	70.76	0.00e+00	743.00
IUUC-Oru-084651	Oryza rufipogon	72.77	0.00e+00	723.00
IUUC-Osa-085940	Oryza sativa	72.77	0.00e+00	723.00
IUUC-Pop-099290	Populus trichocarpa	37.81	2.00e-122	432.00
IUUC-Ppe-102097	Prunus persica	39.01	4.00e-120	424.00
IUUC-Sit-110113	Setaria italica	82.37	0.00e+00	995.00
IUUC-Sly-111836	Solanum lycopersicum	35.64	1.00e-116	412.00
IUUC-Stu-112861	Solanum tuberosum	36.60	3.00e-119	421.00
IUUC-Tca-121206	Theobroma cacao	39.77	4.00e-136	478.00
IUUC-Tae-125504	Triticum aestivum	70.16	0.00e+00	846.00
IUUC-Tur-126514	Triticum urartu	65.88	0.00e+00	686.00
IUUC-Vvi-130884	Vitis vinifera	41.02	5.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence