iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099052

Ensembl Protein ID

POPTR_0003s12230.1

UniProt Accession

B9GW72; B9GW72_POPTR

Genbank Protein ID

EEE78543.2

Protein Name

UBX domain-containing family protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTR_0003s12230g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s12230	POPTR_0003s12230.1	POPTR_0003s12230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	8.70e-09	36.9	507	581

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeL.vspfPrrtlkpeehmstlqeagLvpsg 75
           +++++tl +R+pdG+r  r+F +s++l+++++f++  +v +  ++ L v+p+Prr +++ e   tl+e+gL+++ 
   Q: 507  DENAVTLLVRMPDGSRRGRRFLKSDKLHALFDFIDIGRVVKPGTYRLqVRPYPRRAFSDGEGALTLNELGLTSKQ 581
           56799******************************888888999999789*********************9864 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MARPNQEAIE TFISITGVAE DVAVQKLEEH GGDLNAAVNT HFSEGDRSAM RQPSIPSLQD 60
DVMDIDDDPI EVAPPPRRNP LSIPAESGAM NSFSLLEPLF QRGLFDTGSD FMNQAPFVSQ 120

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Nucleotide Sequence
(Fasta)

AATCCAAAAG AAGAAAAGGC AGCATTTCTA TAGGTAGAGG CTGGAAGACT CAAGTAGAAG 60
CGTAGAATAT CGGAGAAACT CCCCTCGCCT TCTCTCCTCA TTCCTCACCA GCACAAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

KEGG

pop:POPTR_0003s12230g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007541	Arabidopsis thaliana	54.96	2.00e-119	422.00
IUUC-Bol-015077	Brassica oleracea	54.58	1.00e-112	399.00
IUUC-Bra-016932	Brassica rapa	53.04	5.00e-112	397.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence