iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111277

Ensembl Protein ID

Solyc04g074820.1.1

UniProt Accession

K4BU20; K4BU20_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g074820.1	Solyc04g074820.1.1	Solyc04g074820.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-09	36.7	131	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f+d   +++lp C Hvfh +C+ +w         +++CP+Cr
   Q: 131  CAICLNEFEDAeaLRLLPkCSHVFHPNCIDAW------LFSHITCPVCR 173
           ********5544499999**************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKMIIELSHG FCSISLCLFL LAMHVISQSE ITPSPPSPPP FSFDTKIKIN PPTAIILVTL 60
ISVFFAMGIV SVYVRQCADR RFIGDFELAD EDSGRRGARS HGLDPVVITS FPMFFYSDVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATGA TAATCGAGCT AAGCCATGGT TTCTGCTCGA TTTCCCTTTG TTTATTCCTG 60
CTCGCGATGC ATGTTATATC GCAATCAGAA ATAACACCAT CACCACCATC ACCACCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101244662

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002716	Amborella trichopoda	41.05	1.00e-51	196.00
IUUC-Aly-006270	Arabidopsis lyrata	39.06	2.00e-62	231.00
IUUC-Ath-007432	Arabidopsis thaliana	38.80	2.00e-63	235.00
IUUC-Afu-009087	Aspergillus fumigatus	31.54	1.00e-12	65.90
IUUC-Bdi-014474	Brachypodium distachyon	52.76	2.00e-36	145.00
IUUC-Bol-015608	Brassica oleracea	42.27	8.00e-64	236.00
IUUC-Bra-017466	Brassica rapa	42.38	7.00e-64	236.00
IUUC-Gma-043872	Glycine max	47.02	7.00e-62	229.00
IUUC-Lpe-051270	Leersia perrieri	50.68	1.00e-37	149.00
IUUC-Mtr-057905	Medicago truncatula	45.00	1.00e-59	223.00
IUUC-Oba-075528	Oryza barthii	53.08	2.00e-33	135.00
IUUC-Ogl-076953	Oryza glaberrima	51.47	1.00e-33	136.00
IUUC-Ogu-078122	Oryza glumaepatula	51.85	2.00e-33	135.00
IUUC-Oin-079189	Oryza indica	51.85	1.00e-33	136.00
IUUC-Olo-080975	Oryza longistaminata	40.43	2.00e-32	131.00
IUUC-Ome-081871	Oryza meridionalis	39.34	7.00e-38	150.00
IUUC-Oni-082648	Oryza nivara	51.85	2.00e-33	135.00
IUUC-Oru-085268	Oryza rufipogon	38.13	3.00e-42	165.00
IUUC-Osa-085388	Oryza sativa	52.67	1.00e-33	136.00
IUUC-Ppa-095506	Physcomitrella patens	43.57	2.00e-24	106.00
IUUC-Ppe-102023	Prunus persica	42.14	3.00e-59	221.00
IUUC-Sit-109787	Setaria italica	55.04	5.00e-39	154.00
IUUC-Stu-112280	Solanum tuberosum	88.58	0.00e+00	671.00
IUUC-Sbi-114136	Sorghum bicolor	54.48	4.00e-38	151.00
IUUC-Tca-121082	Theobroma cacao	48.77	1.00e-80	292.00
IUUC-Tae-125870	Triticum aestivum	52.31	1.00e-36	146.00
IUUC-Tur-126779	Triticum urartu	48.82	3.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence