iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	47.89	3.00e-10	64.70	IUUC-Dme-031941

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG 60
FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI TGCKSRKTNQ VVVSDNEDVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAATTGTTC TTCTCTCTCG TTCTTCTGTG TATGTATTAT AGGAGCTGTA ATTTAATTTT 60
GTATTATTAT TTTTTCGTGT TTTGACTTTT TATTTTTCTC TCTTTTCATT AAATTTATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00628--PHD
PF13639--zf-RING_2

SMART

SM00249--PHD
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000243	Aegilops tauschii	32.57	2.00e-18	87.80
IUUC-Atr-003066	Amborella trichopoda	44.76	4.00e-59	222.00
IUUC-Aca-004929	Anolis carolinensis	31.29	2.00e-16	81.60
IUUC-Aly-005598	Arabidopsis lyrata	90.60	0.00e+00	1147.00
IUUC-Acl-008371	Aspergillus clavatus	33.33	3.00e-13	69.70
IUUC-Afl-008743	Aspergillus flavus	31.20	3.00e-11	63.20
IUUC-Afu-008965	Aspergillus fumigatus	32.80	1.00e-14	74.30
IUUC-Ani-009406	Aspergillus nidulans	30.60	5.00e-13	68.90
IUUC-Aor-009922	Aspergillus oryzae	31.20	2.00e-11	63.50
IUUC-Ate-010407	Aspergillus terreus	31.67	4.00e-11	62.80
IUUC-Ame-011077	Astyanax mexicanus	55.10	3.00e-10	60.10
IUUC-Bgr-012184	Blumeria graminis	30.83	2.00e-14	73.20
IUUC-Bdi-014588	Brachypodium distachyon	54.59	6.00e-65	242.00
IUUC-Bol-015147	Brassica oleracea	79.72	0.00e+00	806.00
IUUC-Bra-016799	Brassica rapa	81.67	0.00e+00	736.00
IUUC-Cin-025408	Ciona intestinalis	33.33	1.00e-15	77.00
IUUC-Csv-026207	Ciona savignyi	30.71	3.00e-14	70.90
IUUC-Cgl-026545	Colletotrichum gloeosporioides	30.92	6.00e-13	68.60
IUUC-Dre-027694	Danio rerio	44.29	1.00e-09	58.50
IUUC-Dme-031941	Drosophila melanogaster	45.00	7.00e-12	65.90
IUUC-Fox-037887	Fusarium oxysporum	28.07	1.00e-15	77.40
IUUC-Fso-038253	Fusarium solani	30.08	3.00e-13	69.70
IUUC-Ggr-039838	Gaeumannomyces graminis	28.57	7.00e-14	71.60
IUUC-Gga-040178	Gallus gallus	35.67	4.00e-17	84.00
IUUC-Gma-043193	Glycine max	46.82	3.00e-106	378.00
IUUC-Hvu-047154	Hordeum vulgare	47.96	7.00e-68	251.00
IUUC-Kpa-049155	Komagataella pastoris	30.77	3.00e-11	62.40
IUUC-Mor-056964	Magnaporthe oryzae	26.75	2.00e-15	76.60
IUUC-Mtr-057959	Medicago truncatula	46.72	7.00e-100	357.00
IUUC-Mga-059236	Meleagris gallopavo	35.03	2.00e-16	81.60
IUUC-Mdo-061937	Monodelphis domestica	34.01	1.00e-14	75.50
IUUC-Mac-065474	Musa acuminata	37.92	4.00e-85	308.00
IUUC-Mpu-066615	Mustela putorius furo	35.25	7.00e-14	73.20
IUUC-Nfi-068246	Neosartorya fischeri	32.00	7.00e-14	71.60
IUUC-Oba-075127	Oryza barthii	50.19	7.00e-68	251.00
IUUC-Obr-076166	Oryza brachyantha	53.18	2.00e-65	243.00
IUUC-Oin-079478	Oryza indica	52.53	3.00e-63	235.00
IUUC-Ome-081535	Oryza meridionalis	53.97	2.00e-66	247.00
IUUC-Pma-094431	Petromyzon marinus	33.33	1.00e-14	74.30
IUUC-Pfo-096311	Poecilia formosa	31.33	3.00e-12	64.70
IUUC-Pop-099591	Populus trichocarpa	47.94	1.00e-123	436.00
IUUC-Ptt-103977	Puccinia triticina	38.18	1.00e-06	45.80
IUUC-Pte-104336	Pyrenophora teres	28.24	6.00e-11	62.00
IUUC-Pyt-104805	Pyrenophora triticirepentis	27.48	2.00e-10	60.50
IUUC-Smo-108936	Selaginella moellendorffii	58.78	3.00e-41	160.00
IUUC-Sit-110177	Setaria italica	52.17	1.00e-68	253.00
IUUC-Sly-111835	Solanum lycopersicum	53.70	3.00e-79	289.00
IUUC-Stu-112898	Solanum tuberosum	53.45	4.00e-80	292.00
IUUC-Tre-121933	Trichoderma reesei	31.30	2.00e-14	73.90
IUUC-Tvi-122509	Trichoderma virens	28.24	1.00e-13	70.90
IUUC-Tae-123262	Triticum aestivum	47.42	7.00e-70	258.00
IUUC-Tur-126349	Triticum urartu	47.10	3.00e-69	256.00
IUUC-Vda-129876	Verticillium dahliae	31.58	4.00e-12	65.90
IUUC-Xma-133439	Xiphophorus maculatus	50.91	2.00e-10	60.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence