iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099544

Ensembl Protein ID

POPTR_0019s04940.1

UniProt Accession

B9I5Y6; B9I5Y6_POPTR

Genbank Protein ID

EEE95621.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_571214; POPTR_0013s05540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s04940	POPTR_0019s04940.1	POPTR_0019s04940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-08	35.8	215	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++ + ++  ++ C++  C+  ewfH+ C++l+  e++ +  kw+Cp Cr+
   Q: 215  TYC-VCHQVSFGD--MIACDNenCQggEWFHYSCVGLT-PETRFKG-KWYCPTCRN 265
           69*.********9..*****999*999***********.4444444.4******85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYANTL PAELQRLLNT IRELDDRSQS MINQTRQQTN YCLGLASQSS 60
KKGNGSIYNC YNTNNREEDD AVEKMRKDIE ANQDNALILC TEKVLLARQA YELIDSHIKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAAATCAG AAACCTGCAA AACCCTAGAA TTTACGAAAA CCTAATCCCT GATCTCTATA 60
AATGGCAATT GCTCGAACTG GAGTATACGT TGATGATTAC CTTGAGTGTA AGTTCCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

pop:POPTR_0013s05540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	70.83	2.00e-98	351.00
IUUC-Ath-006578	Arabidopsis thaliana	80.22	2.00e-108	384.00
IUUC-Bdi-014508	Brachypodium distachyon	63.91	9.00e-98	348.00
IUUC-Bol-015751	Brassica oleracea	79.10	1.00e-115	408.00
IUUC-Bra-017962	Brassica rapa	80.97	3.00e-115	407.00
IUUC-Cel-018700	Caenorhabditis elegans	44.00	9.00e-05	42.40
IUUC-Csv-026288	Ciona savignyi	29.97	6.00e-29	120.00
IUUC-Dse-031323	Dothistroma septosporum	51.90	1.00e-16	81.30
IUUC-Gmo-038982	Gadus morhua	32.59	3.00e-34	137.00
IUUC-Gma-044224	Glycine max	81.11	5.00e-118	416.00
IUUC-Hvu-047275	Hordeum vulgare	62.31	9.00e-98	348.00
IUUC-Lpe-051512	Leersia perrieri	60.15	4.00e-92	330.00
IUUC-Lma-053234	Leptosphaeria maculans	55.17	3.00e-14	73.60
IUUC-Mtr-058288	Medicago truncatula	80.07	2.00e-124	437.00
IUUC-Mac-065671	Musa acuminata	67.92	5.00e-106	376.00
IUUC-Obr-076822	Oryza brachyantha	65.04	7.00e-102	362.00
IUUC-Ogl-077432	Oryza glaberrima	63.53	2.00e-100	357.00
IUUC-Osa-085802	Oryza sativa	63.53	2.00e-100	357.00
IUUC-Ola-087103	Oryzias latipes	32.08	9.00e-29	119.00
IUUC-Olu-087851	Ostreococcus lucimarinus	62.26	5.00e-17	80.50
IUUC-Ppa-096009	Physcomitrella patens	58.61	3.00e-83	300.00
IUUC-Pfo-096617	Poecilia formosa	32.74	6.00e-35	140.00
IUUC-Ppe-101698	Prunus persica	82.22	4.00e-101	360.00
IUUC-Pyt-104787	Pyrenophora triticirepentis	55.17	3.00e-14	73.60
IUUC-Smo-108678	Selaginella moellendorffii	60.53	2.00e-88	317.00
IUUC-Sit-110189	Setaria italica	64.29	4.00e-96	343.00
IUUC-Sly-111209	Solanum lycopersicum	77.61	2.00e-104	370.00
IUUC-Stu-112762	Solanum tuberosum	77.61	2.00e-104	370.00
IUUC-Sbi-114379	Sorghum bicolor	65.04	6.00e-102	362.00
IUUC-Tni-120024	Tetraodon nigroviridis	32.33	4.00e-28	117.00
IUUC-Tca-121271	Theobroma cacao	82.22	7.00e-116	409.00
IUUC-Tre-121950	Trichoderma reesei	61.02	2.00e-18	87.80
IUUC-Tae-122798	Triticum aestivum	62.69	1.00e-98	352.00
IUUC-Vvi-131583	Vitis vinifera	82.46	1.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence