iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114367

UUCD1 version

UUC-SoB-00253

Ensembl Protein ID

Sb01g005810.1

UniProt Accession

A0A1B6PEC5; A0A1B6PEC5_SORBI

Genbank Protein ID

KXG24033.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G175600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g005810	Sb01g005810.1	Sb01g005810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-08	34.3	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ + dg  ++ lp CgH+fh++C+  w       + + +CP+Cr
   Q: 129  CSICLDNYGDGevLRKLPeCGHLFHRECVDPW------LRHHPTCPVCR 171
           ********77655777889*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGSGGTPPVG LTPVDSSSSG MFSTDRIGGF GYGVGVSVGI LLLITTITLA SYFCTRAPVD 60
AAAGEAAPSS RRRHGGGRGG GAGGGEGAHD DVELGIDEAT LKGYPEVVYG EAKKEAKAAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTCCG GCGGGACGCC GCCCGTGGGG CTGACACCGG TGGACAGCAG CTCCAGCGGC 60
ATGTTCAGCA CCGACCGCAT CGGCGGCTTC GGCTACGGCG TCGGCGTCTC CGTCGGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006033	Arabidopsis lyrata	47.67	3.00e-27	113.00
IUUC-Ath-007108	Arabidopsis thaliana	48.26	4.00e-28	117.00
IUUC-Bta-012478	Bos taurus	50.00	9.00e-13	68.20
IUUC-Bdi-014078	Brachypodium distachyon	74.19	9.00e-40	155.00
IUUC-Bra-016974	Brassica rapa	48.82	7.00e-31	125.00
IUUC-Fso-038193	Fusarium solani	42.59	3.00e-10	55.10
IUUC-Lpe-051365	Leersia perrieri	71.58	6.00e-40	155.00
IUUC-Mtr-058770	Medicago truncatula	50.00	6.00e-21	92.40
IUUC-Mac-065006	Musa acuminata	65.38	1.00e-27	115.00
IUUC-Ogl-077901	Oryza glaberrima	77.42	3.00e-39	153.00
IUUC-Oin-079366	Oryza indica	75.13	6.00e-40	155.00
IUUC-Ome-081462	Oryza meridionalis	77.30	2.00e-39	154.00
IUUC-Oni-082925	Oryza nivara	76.47	4.00e-39	153.00
IUUC-Oru-085270	Oryza rufipogon	74.87	5.00e-39	152.00
IUUC-Osa-085759	Oryza sativa	74.87	5.00e-39	152.00
IUUC-Pop-099253	Populus trichocarpa	49.31	8.00e-27	112.00
IUUC-Ppe-101217	Prunus persica	56.86	2.00e-29	120.00
IUUC-Sit-110656	Setaria italica	81.32	1.00e-45	174.00
IUUC-Tae-125196	Triticum aestivum	67.65	2.00e-40	157.00
IUUC-Tur-126583	Triticum urartu	80.58	4.00e-36	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence