iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013113

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02072549

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000015630.3	ENSBTAT00000020757.3	ENSBTAP00000020757.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-07	30.7	557	598

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 557  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 598
           9*******5554499****************......**********8 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MESSDCNDKG SGDQSAAQRR SQMDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGEST 60
EEELLRRLQQ IKEGPPPQNS DENRGGDSSD DVSNGDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGCTGCTT GGTAACAATG GGGAAGATAA TGGCTGCCTG AGCAACGTCT CCGAGCAGGC 60
GCTGGACTAG AGGCGGGTCT CGACCAGCGA CTCATCGGAG GCGGGCTTGA GAGCTGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060816--P:random inactivation of X chromosome
GO:1900095--P:regulation of dosage compensation by inactivation of X chromosome

KEGG

bta:539871

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000316	Aegilops tauschii	42.37	5.00e-10	57.00
IUUC-Aml-001407	Ailuropoda melanoleuca	96.61	0.00e+00	707.00
IUUC-Atr-002539	Amborella trichopoda	46.43	2.00e-14	73.60
IUUC-Apl-003969	Anas platyrhynchos	75.65	0.00e+00	789.00
IUUC-Aca-005377	Anolis carolinensis	68.85	9.00e-142	497.00
IUUC-Aly-005870	Arabidopsis lyrata	42.70	4.00e-16	79.00
IUUC-Ath-007543	Arabidopsis thaliana	49.21	5.00e-15	74.30
IUUC-Bdi-014392	Brachypodium distachyon	47.06	3.00e-14	72.00
IUUC-Bol-015085	Brassica oleracea	41.94	8.00e-16	77.80
IUUC-Bra-018013	Brassica rapa	42.86	3.00e-16	79.30
IUUC-Cja-018860	Callithrix jacchus	94.76	0.00e+00	681.00
IUUC-Cfa-020358	Canis familiaris	96.15	0.00e+00	702.00
IUUC-Cpo-021533	Cavia porcellus	93.94	0.00e+00	641.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	1.00e-13	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	92.76	0.00e+00	650.00
IUUC-Cho-024536	Choloepus hoffmanni	86.71	1.00e-169	589.00
IUUC-Cne-026941	Cryptococcus neoformans	34.94	2.00e-10	61.20
IUUC-Dno-029606	Dasypus novemcinctus	94.53	0.00e+00	746.00
IUUC-Dor-031042	Dipodomys ordii	85.97	0.00e+00	629.00
IUUC-Ete-033099	Echinops telfairi	89.59	0.00e+00	655.00
IUUC-Eca-033976	Equus caballus	95.92	0.00e+00	759.00
IUUC-Eeu-034964	Erinaceus europaeus	87.92	0.00e+00	774.00
IUUC-Fca-035662	Felis catus	96.83	0.00e+00	708.00
IUUC-Fal-036996	Ficedula albicollis	74.63	0.00e+00	758.00
IUUC-Gmo-039207	Gadus morhua	76.86	1.00e-47	183.00
IUUC-Gga-040816	Gallus gallus	76.71	0.00e+00	790.00
IUUC-Gma-043292	Glycine max	47.37	3.00e-16	79.30
IUUC-Ggo-044754	Gorilla gorilla	95.70	0.00e+00	723.00
IUUC-Hsa-045776	Homo sapiens	95.70	0.00e+00	723.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	73.90
IUUC-Itr-048044	Ictidomys tridecemlineatus	94.78	0.00e+00	724.00
IUUC-Lch-050178	Latimeria chalumnae	66.08	0.00e+00	657.00
IUUC-Lpe-051680	Leersia perrieri	42.86	2.00e-14	73.90
IUUC-Loc-052124	Lepisosteus oculatus	61.30	1.00e-104	374.00
IUUC-Laf-054328	Loxodonta africana	94.56	0.00e+00	712.00
IUUC-Mcc-054739	Macaca mulatta	95.70	0.00e+00	722.00
IUUC-Meu-056359	Macropus eugenii	75.00	7.00e-146	510.00
IUUC-Mtr-058167	Medicago truncatula	47.37	2.00e-15	76.30
IUUC-Mga-059838	Meleagris gallopavo	76.87	0.00e+00	797.00
IUUC-Mmr-060608	Microcebus murinus	93.45	0.00e+00	694.00
IUUC-Mdo-061961	Monodelphis domestica	77.42	7.00e-151	527.00
IUUC-Mmu-064278	Mus musculus	86.02	1.00e-166	580.00
IUUC-Mac-065396	Musa acuminata	43.42	2.00e-14	73.20
IUUC-Mpu-066539	Mustela putorius furo	86.27	2.00e-167	581.00
IUUC-Mlu-066930	Myotis lucifugus	95.92	0.00e+00	766.00
IUUC-Nle-069311	Nomascus leucogenys	96.15	0.00e+00	727.00
IUUC-Opr-071124	Ochotona princeps	92.23	1.00e-88	320.00
IUUC-Oan-073036	Ornithorhynchus anatinus	74.71	2.00e-152	532.00
IUUC-Ocu-073795	Oryctolagus cuniculus	93.21	0.00e+00	659.00
IUUC-Oba-075403	Oryza barthii	42.86	2.00e-14	73.60
IUUC-Obr-076503	Oryza brachyantha	44.16	3.00e-14	72.80
IUUC-Ogl-077574	Oryza glaberrima	42.86	2.00e-14	73.60
IUUC-Ogu-077986	Oryza glumaepatula	42.86	2.00e-14	73.60
IUUC-Oin-079091	Oryza indica	44.16	2.00e-14	73.60
IUUC-Ome-081627	Oryza meridionalis	42.86	2.00e-14	73.60
IUUC-Oni-082260	Oryza nivara	42.86	2.00e-14	73.60
IUUC-Opu-083578	Oryza punctata	42.86	2.00e-14	73.90
IUUC-Oru-084794	Oryza rufipogon	42.86	2.00e-14	73.60
IUUC-Osa-085348	Oryza sativa	42.86	2.00e-14	73.60
IUUC-Ola-087461	Oryzias latipes	88.17	1.00e-49	191.00
IUUC-Oga-088022	Otolemur garnettii	92.41	0.00e+00	957.00
IUUC-Oar-089348	Ovis aries	99.05	0.00e+00	754.00
IUUC-Ptr-090604	Pan troglodytes	95.25	0.00e+00	720.00
IUUC-Pan-092322	Papio anubis	95.70	0.00e+00	722.00
IUUC-Psi-093936	Pelodiscus sinensis	72.68	0.00e+00	731.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	2.00e-16	80.50
IUUC-Pab-098671	Pongo abelii	95.70	0.00e+00	723.00
IUUC-Pop-099808	Populus trichocarpa	45.95	9.00e-16	77.80
IUUC-Pca-100263	Procavia capensis	92.76	0.00e+00	686.00
IUUC-Pva-102709	Pteropus vampyrus	91.82	0.00e+00	886.00
IUUC-Ptt-103976	Puccinia triticina	43.75	2.00e-10	58.90
IUUC-Rno-105759	Rattus norvegicus	89.07	2.00e-174	605.00
IUUC-Sha-106792	Sarcophilus harrisii	76.65	2.00e-136	479.00
IUUC-Smo-109572	Selaginella moellendorffii	44.09	2.00e-15	75.90
IUUC-Sit-109852	Setaria italica	42.86	2.00e-14	73.60
IUUC-Sly-111747	Solanum lycopersicum	62.86	2.00e-12	67.00
IUUC-Stu-112609	Solanum tuberosum	47.22	2.00e-16	79.70
IUUC-Sar-113271	Sorex araneus	85.52	2.00e-177	615.00
IUUC-Sbi-114435	Sorghum bicolor	44.16	2.00e-14	73.60
IUUC-Ssc-115738	Sus scrofa	97.74	0.00e+00	755.00
IUUC-Tgu-117205	Taeniopygia guttata	75.45	0.00e+00	767.00
IUUC-Tru-118123	Takifugu rubripes	86.67	7.00e-55	208.00
IUUC-Tsy-119421	Tarsius syrichta	95.93	0.00e+00	769.00
IUUC-Tca-121367	Theobroma cacao	47.37	3.00e-16	79.70
IUUC-Tae-124344	Triticum aestivum	43.06	1.00e-12	65.90
IUUC-Tur-126084	Triticum urartu	42.86	3.00e-13	71.60
IUUC-Tbe-127543	Tupaia belangeri	92.80	0.00e+00	986.00
IUUC-Vpa-130058	Vicugna pacos	97.96	0.00e+00	719.00
IUUC-Vvi-131093	Vitis vinifera	47.37	1.00e-16	80.50
IUUC-Xtr-132663	Xenopus tropicalis	61.87	1.00e-108	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence