iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	52.61	2.00e-66	249.00	IUUC-Hsa-046680
UBD/Other/Other	52.61	2.00e-66	249.00	IUUC-Hsa-046680
UBD/Other/Other	50.27	2.00e-50	194.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MVLRFCCHLL TYSVSLLPPI TMFFDGYHYH GTTFEQSYRC YPASFIDKPQ LESGDKIIMP 60
PSALDRLASL HIDYPMLFEL RNAGIERVTH CGVLEFIAEE GMIYMPYWMM QNLLLQEGDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGGGTTGT GTCTGGAATC AATTACTTCC TAAAGGTAAT TTTATTGGTC GGGCAGCTCA 60
ATCGGTGGTT TCTGAGTTCT TATTCTTCTC TGATAATCTC AAGACGAGCT TTTAATTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005829--C:cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	66.28	6.00e-122	429.00
IUUC-Aml-001398	Ailuropoda melanoleuca	52.61	1.00e-63	236.00
IUUC-Atr-002449	Amborella trichopoda	68.64	2.00e-101	361.00
IUUC-Apl-004065	Anas platyrhynchos	54.68	7.00e-59	219.00
IUUC-Aca-004973	Anolis carolinensis	52.61	6.00e-67	246.00
IUUC-Aly-005501	Arabidopsis lyrata	76.01	7.00e-134	469.00
IUUC-Ago-007918	Ashbya gossypii	41.32	2.00e-48	185.00
IUUC-Acl-008362	Aspergillus clavatus	57.07	2.00e-64	238.00
IUUC-Afl-008690	Aspergillus flavus	55.45	7.00e-66	243.00
IUUC-Afu-008787	Aspergillus fumigatus	56.06	5.00e-65	240.00
IUUC-Ani-009385	Aspergillus nidulans	57.65	3.00e-58	218.00
IUUC-Ang-009709	Aspergillus niger	55.50	2.00e-65	242.00
IUUC-Aor-010240	Aspergillus oryzae	55.45	7.00e-66	243.00
IUUC-Ate-010551	Aspergillus terreus	55.50	1.00e-64	239.00
IUUC-Ame-011417	Astyanax mexicanus	54.35	4.00e-66	244.00
IUUC-Bgr-011986	Blumeria graminis	52.43	1.00e-57	216.00
IUUC-Bta-012559	Bos taurus	58.70	6.00e-59	219.00
IUUC-Bci-013767	Botrytis cinerea	51.87	2.00e-53	202.00
IUUC-Bdi-014579	Brachypodium distachyon	68.44	4.00e-111	393.00
IUUC-Bol-015423	Brassica oleracea	87.08	8.00e-135	472.00
IUUC-Bra-017620	Brassica rapa	87.27	2.00e-141	494.00
IUUC-Cel-018590	Caenorhabditis elegans	48.78	2.00e-44	171.00
IUUC-Cja-019487	Callithrix jacchus	53.04	4.00e-64	237.00
IUUC-Cfa-020497	Canis familiaris	53.25	5.00e-64	236.00
IUUC-Cpo-022150	Cavia porcellus	52.61	2.00e-63	235.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	61.44	3.00e-77	280.00
IUUC-Csa-023602	Chlorocebus sabaeus	52.61	9.00e-64	236.00
IUUC-Cin-025594	Ciona intestinalis	49.57	2.00e-62	231.00
IUUC-Csv-026040	Ciona savignyi	40.50	5.00e-63	233.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	46.43	4.00e-51	194.00
IUUC-Cne-026990	Cryptococcus neoformans	44.62	2.00e-42	166.00
IUUC-Cme-027323	Cyanidioschyzon merolae	47.98	1.00e-48	186.00
IUUC-Dre-027987	Danio rerio	53.78	4.00e-64	237.00
IUUC-Dor-030294	Dipodomys ordii	53.04	4.00e-64	237.00
IUUC-Dse-031411	Dothistroma septosporum	49.23	2.00e-54	205.00
IUUC-Dme-031798	Drosophila melanogaster	47.20	3.00e-61	228.00
IUUC-Ete-032432	Echinops telfairi	52.36	4.00e-63	234.00
IUUC-Eca-034427	Equus caballus	52.61	9.00e-64	236.00
IUUC-Eeu-034917	Erinaceus europaeus	57.64	1.00e-44	172.00
IUUC-Fca-035380	Felis catus	53.25	5.00e-64	236.00
IUUC-Fal-037659	Ficedula albicollis	52.17	3.00e-63	234.00
IUUC-Fox-038062	Fusarium oxysporum	53.66	1.00e-21	95.50
IUUC-Fso-038111	Fusarium solani	47.31	6.00e-50	190.00
IUUC-Gmo-039298	Gadus morhua	44.37	4.00e-60	224.00
IUUC-Ggr-039771	Gaeumannomyces graminis	49.46	4.00e-52	197.00
IUUC-Gga-040313	Gallus gallus	52.17	5.00e-63	233.00
IUUC-Gac-042009	Gasterosteus aculeatus	52.81	2.00e-60	225.00
IUUC-Gma-043844	Glycine max	64.31	7.00e-109	386.00
IUUC-Ggo-044639	Gorilla gorilla	45.49	2.00e-58	218.00
IUUC-Hsa-046680	Homo sapiens	52.61	9.00e-64	236.00
IUUC-Hvu-047614	Hordeum vulgare	69.14	1.00e-120	425.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	52.61	1.00e-63	236.00
IUUC-Kpa-049136	Komagataella pastoris	41.35	5.00e-54	204.00
IUUC-Lch-050607	Latimeria chalumnae	51.82	1.00e-63	235.00
IUUC-Lpe-050726	Leersia perrieri	68.35	1.00e-107	382.00
IUUC-Loc-051848	Lepisosteus oculatus	53.68	4.00e-64	237.00
IUUC-Lma-053187	Leptosphaeria maculans	51.76	6.00e-58	217.00
IUUC-Laf-053569	Loxodonta africana	52.36	4.00e-63	234.00
IUUC-Mcc-055275	Macaca mulatta	52.81	2.00e-63	234.00
IUUC-Mor-056967	Magnaporthe oryzae	46.77	8.00e-51	193.00
IUUC-Mpo-057399	Magnaporthe poae	47.76	1.00e-52	199.00
IUUC-Mtr-058353	Medicago truncatula	73.99	1.00e-123	434.00
IUUC-Mla-058830	Melampsora laricipopulina	41.29	1.00e-41	163.00
IUUC-Mga-059803	Meleagris gallopavo	54.68	9.00e-59	219.00
IUUC-Mvi-060456	Microbotryum violaceum	46.52	2.00e-44	172.00
IUUC-Mmr-060573	Microcebus murinus	52.61	7.00e-64	236.00
IUUC-Mdo-062831	Monodelphis domestica	53.48	2.00e-64	238.00
IUUC-Mmu-064302	Mus musculus	53.04	3.00e-64	238.00
IUUC-Mac-064745	Musa acuminata	71.66	7.00e-118	416.00
IUUC-Mpu-065922	Mustela putorius furo	52.61	9.00e-64	236.00
IUUC-Mlu-068236	Myotis lucifugus	51.93	2.00e-62	231.00
IUUC-Nfi-068417	Neosartorya fischeri	56.54	1.00e-64	239.00
IUUC-Ncr-068747	Neurospora crassa	45.05	3.00e-51	194.00
IUUC-Nle-069948	Nomascus leucogenys	45.32	2.00e-58	218.00
IUUC-Opr-070919	Ochotona princeps	44.31	2.00e-51	195.00
IUUC-Ont-071467	Oreochromis niloticus	53.65	2.00e-64	238.00
IUUC-Oan-073436	Ornithorhynchus anatinus	44.97	9.00e-34	135.00
IUUC-Ocu-074427	Oryctolagus cuniculus	44.52	9.00e-62	229.00
IUUC-Oba-075440	Oryza barthii	65.44	7.00e-116	409.00
IUUC-Obr-076275	Oryza brachyantha	68.12	3.00e-106	377.00
IUUC-Ogl-077237	Oryza glaberrima	65.14	8.00e-116	409.00
IUUC-Ogu-078934	Oryza glumaepatula	65.44	7.00e-118	416.00
IUUC-Oin-079475	Oryza indica	65.14	5.00e-115	406.00
IUUC-Olo-080285	Oryza longistaminata	80.45	8.00e-88	315.00
IUUC-Ome-081887	Oryza meridionalis	65.44	1.00e-116	411.00
IUUC-Oni-082064	Oryza nivara	65.44	7.00e-116	409.00
IUUC-Opu-083610	Oryza punctata	64.42	6.00e-113	399.00
IUUC-Oru-084911	Oryza rufipogon	64.53	2.00e-115	408.00
IUUC-Osa-085366	Oryza sativa	65.44	7.00e-116	409.00
IUUC-Ola-086846	Oryzias latipes	44.98	3.00e-57	214.00
IUUC-Olu-087879	Ostreococcus lucimarinus	49.50	1.00e-77	282.00
IUUC-Oga-089017	Otolemur garnettii	52.79	2.00e-63	235.00
IUUC-Oar-089970	Ovis aries	53.04	9.00e-64	236.00
IUUC-Ptr-091147	Pan troglodytes	49.33	9.00e-60	223.00
IUUC-Pan-091757	Papio anubis	46.75	1.00e-52	199.00
IUUC-Psi-093931	Pelodiscus sinensis	52.61	2.00e-63	235.00
IUUC-Pno-094775	Phaeosphaeria nodorum	49.28	1.00e-54	205.00
IUUC-Ppa-095156	Physcomitrella patens	62.54	5.00e-105	373.00
IUUC-Pfo-097295	Poecilia formosa	54.27	1.00e-65	242.00
IUUC-Pab-098537	Pongo abelii	52.61	9.00e-64	236.00
IUUC-Pop-099436	Populus trichocarpa	61.68	2.00e-106	377.00
IUUC-Pca-100631	Procavia capensis	44.03	4.00e-54	204.00
IUUC-Ppe-101259	Prunus persica	76.78	3.00e-137	480.00
IUUC-Pva-102679	Pteropus vampyrus	46.22	8.00e-56	209.00
IUUC-Pgr-103475	Puccinia graminis	43.63	1.00e-42	167.00
IUUC-Ptt-104012	Puccinia triticina	35.48	5.00e-26	111.00
IUUC-Pte-104071	Pyrenophora teres	50.75	3.00e-56	211.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	50.75	2.00e-56	211.00
IUUC-Rno-104858	Rattus norvegicus	53.04	2.00e-64	238.00
IUUC-Sce-106174	Saccharomyces cerevisiae	50.27	8.00e-51	193.00
IUUC-Sha-107075	Sarcophilus harrisii	53.04	6.00e-64	236.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	43.59	4.00e-55	207.00
IUUC-Spo-108259	Schizosaccharomyces pombe	41.95	8.00e-49	186.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	51.57	8.00e-46	176.00
IUUC-Smo-109290	Selaginella moellendorffii	60.94	9.00e-102	362.00
IUUC-Sit-109992	Setaria italica	63.00	4.00e-115	407.00
IUUC-Sly-110858	Solanum lycopersicum	70.77	1.00e-118	418.00
IUUC-Stu-112129	Solanum tuberosum	73.15	8.00e-129	452.00
IUUC-Sar-113061	Sorex araneus	53.04	2.00e-64	238.00
IUUC-Sbi-114882	Sorghum bicolor	65.85	2.00e-116	411.00
IUUC-Sre-115104	Sporisorium reilianum	50.82	9.00e-48	183.00
IUUC-Ssc-115403	Sus scrofa	53.25	1.00e-63	236.00
IUUC-Tgu-117013	Taeniopygia guttata	52.61	7.00e-64	236.00
IUUC-Tru-118307	Takifugu rubripes	53.04	5.00e-62	230.00
IUUC-Tsy-119309	Tarsius syrichta	52.38	4.00e-23	101.00
IUUC-Tni-120209	Tetraodon nigroviridis	45.16	4.00e-62	230.00
IUUC-Tca-121421	Theobroma cacao	73.46	1.00e-130	458.00
IUUC-Tre-122235	Trichoderma reesei	45.88	5.00e-50	191.00
IUUC-Tvi-122421	Trichoderma virens	45.88	4.00e-49	187.00
IUUC-Tae-124587	Triticum aestivum	69.04	1.00e-122	431.00
IUUC-Tur-126353	Triticum urartu	38.92	7.00e-28	118.00
IUUC-Tme-126918	Tuber melanosporum	41.75	4.00e-56	211.00
IUUC-Ttr-129286	Tursiops truncatus	46.92	6.00e-55	207.00
IUUC-Uma-129404	Ustilago maydis	50.27	3.00e-47	181.00
IUUC-Vda-129746	Verticillium dahliae	47.34	1.00e-50	192.00
IUUC-Vpa-130648	Vicugna pacos	34.83	1.00e-07	49.70
IUUC-Vvi-131301	Vitis vinifera	73.31	1.00e-114	405.00
IUUC-Xtr-132583	Xenopus tropicalis	53.02	1.00e-62	232.00
IUUC-Xma-133129	Xiphophorus maculatus	45.86	7.00e-66	243.00
IUUC-Yli-134515	Yarrowia lipolytica	44.86	3.00e-47	181.00
IUUC-Zma-135398	Zea mays	66.88	2.00e-119	421.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence