iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095680

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545100

Gene Name

PHYPADRAFT_221323

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S211_106V6	PP1S211_106V6.1	PP1S211_106V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-33	113.4	343	373
UBD/Beta-Prp	5.70e-40	138.1	152	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH++ + +++f +++ ++sGsdDg++ +W++
   Q: 343  GHQAHIESCCFiTNGEFLSGSDDGSVSLWST 373
           89999*******8899*************95 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdls.........................tgkcvhtlkghedsvlslsfspsgdklvsGshdrti 118
            h + vta+++s+d+ +  ++s+D++i  w+++                          +++  + ++ ++ +l+l++s +g +l+sG+ dr i
   Q: 152  RHRQSVTAICISDDDTLGFSASKDGMIVQWNVEtgtsdkyqfpgnsvdpstangglvqGSTIKKAGRKGSRHILALAVSSDGRYLASGGLDRAI 245
           58999**********9****************999*******************999777777777899************************* PP
   S: 119  rvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtg 212
           ++wd++t+q l+  ++gh+g+v+++++ + ++ l+s+slDrt++lW+++  + ++tl g h+++v  ++  + +++++s+++d+t++lw + ++
   Q: 246  HLWDTRTRQHLQ-AFNGHRGAVTGLAFRQGTQQLMSSSLDRTIKLWSVEDRSYIDTLYG-HQSDVIAIDCLR-QERILSCGRDRTLRLWKVPEE 336
           ************.****************99**************************99.*********999.58****************877 PP
   S: 213  ecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           +    ++gh++ + s  f  n+  ++sgs+Dgs+++W + +++++
   Q: 337  S-QLVFRGHQAHIESCCFITNG-EFLSGSDDGSVSLWSTLKKKPV 379
           6.889*************9555.567***********87777665 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAKVRKRAQP SGRKEAGKKR KVKGAEERGA NAAVKSKRDE EILSEEEDEE FGNGGEAPVS 60
EEEEEEVDLE TADEKRLRIA RAYLERTRQA AADAEDDVDG ETTDQRMGAR DSMVADLLQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGCGATTG CCTCAGCCGA CCTTCGATGT TCAGAGTCAT CGCTTGTTCC GGAAGGTTGT 60
ATCAGTAGCA ACTCCTCCTG CGCGAACTGC GAATTGCAGC CGTTGCTATC CCTCGAATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0006364--P:rRNA processing

KEGG

ppp:PHYPADRAFT_221323

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	44.17	2.00e-95	342.00
IUUC-Aml-002072	Ailuropoda melanoleuca	40.15	8.00e-79	286.00
IUUC-Atr-002824	Amborella trichopoda	53.25	2.00e-127	448.00
IUUC-Apl-003264	Anas platyrhynchos	38.78	2.00e-74	272.00
IUUC-Aca-004898	Anolis carolinensis	38.31	4.00e-79	288.00
IUUC-Aly-006383	Arabidopsis lyrata	48.14	1.00e-102	366.00
IUUC-Ath-007119	Arabidopsis thaliana	46.83	2.00e-113	401.00
IUUC-Acl-008345	Aspergillus clavatus	29.84	3.00e-44	172.00
IUUC-Ang-009774	Aspergillus niger	30.34	5.00e-46	178.00
IUUC-Ate-010449	Aspergillus terreus	28.97	1.00e-44	174.00
IUUC-Ame-011860	Astyanax mexicanus	38.38	2.00e-84	305.00
IUUC-Bgr-012213	Blumeria graminis	29.62	3.00e-55	209.00
IUUC-Bta-012698	Bos taurus	39.90	5.00e-78	284.00
IUUC-Bdi-014790	Brachypodium distachyon	47.38	2.00e-105	375.00
IUUC-Bol-016068	Brassica oleracea	48.55	2.00e-105	375.00
IUUC-Bra-017410	Brassica rapa	48.07	7.00e-98	350.00
IUUC-Cja-019532	Callithrix jacchus	38.99	3.00e-78	285.00
IUUC-Cfa-020961	Canis familiaris	41.16	9.00e-78	283.00
IUUC-Cpo-021527	Cavia porcellus	40.20	4.00e-76	278.00
IUUC-Csa-023106	Chlorocebus sabaeus	40.05	2.00e-76	279.00
IUUC-Csv-026172	Ciona savignyi	35.38	1.00e-74	273.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	29.75	3.00e-52	198.00
IUUC-Cme-027125	Cyanidioschyzon merolae	27.03	7.00e-34	137.00
IUUC-Dre-027919	Danio rerio	37.89	1.00e-81	296.00
IUUC-Dno-029684	Dasypus novemcinctus	41.25	5.00e-59	221.00
IUUC-Dor-030363	Dipodomys ordii	36.68	5.00e-35	141.00
IUUC-Dse-031503	Dothistroma septosporum	30.32	3.00e-45	176.00
IUUC-Dme-031979	Drosophila melanogaster	31.89	2.00e-66	245.00
IUUC-Eca-033735	Equus caballus	39.90	7.00e-77	280.00
IUUC-Fca-036193	Felis catus	39.87	2.00e-79	289.00
IUUC-Fal-037058	Ficedula albicollis	38.90	2.00e-78	285.00
IUUC-Gmo-038796	Gadus morhua	36.25	1.00e-66	246.00
IUUC-Ggr-040074	Gaeumannomyces graminis	27.92	8.00e-50	191.00
IUUC-Gga-040743	Gallus gallus	41.25	2.00e-65	241.00
IUUC-Gac-042583	Gasterosteus aculeatus	35.39	1.00e-76	279.00
IUUC-Gma-042659	Glycine max	52.97	6.00e-129	453.00
IUUC-Ggo-045543	Gorilla gorilla	39.66	2.00e-76	279.00
IUUC-Hsa-047017	Homo sapiens	39.66	4.00e-76	278.00
IUUC-Hvu-047173	Hordeum vulgare	48.30	5.00e-112	397.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	38.55	2.00e-79	289.00
IUUC-Kpa-049262	Komagataella pastoris	26.39	2.00e-38	152.00
IUUC-Lch-050566	Latimeria chalumnae	38.64	1.00e-71	263.00
IUUC-Lpe-051651	Leersia perrieri	48.24	3.00e-111	394.00
IUUC-Loc-051997	Lepisosteus oculatus	38.01	3.00e-78	285.00
IUUC-Lma-053182	Leptosphaeria maculans	26.04	7.00e-40	157.00
IUUC-Laf-054105	Loxodonta africana	39.17	3.00e-75	275.00
IUUC-Mcc-055215	Macaca mulatta	39.66	3.00e-76	278.00
IUUC-Meu-055943	Macropus eugenii	36.56	2.00e-70	259.00
IUUC-Mor-057069	Magnaporthe oryzae	30.10	5.00e-53	201.00
IUUC-Mpo-057358	Magnaporthe poae	38.69	8.00e-48	184.00
IUUC-Mtr-058209	Medicago truncatula	52.14	3.00e-123	434.00
IUUC-Mla-059043	Melampsora laricipopulina	25.74	6.00e-37	148.00
IUUC-Mga-060024	Meleagris gallopavo	38.75	2.00e-70	258.00
IUUC-Mmr-061403	Microcebus murinus	38.11	7.00e-78	283.00
IUUC-Mdo-063026	Monodelphis domestica	37.59	4.00e-73	268.00
IUUC-Mmu-063646	Mus musculus	40.88	2.00e-79	288.00
IUUC-Mac-065149	Musa acuminata	54.46	6.00e-133	466.00
IUUC-Mpu-065760	Mustela putorius furo	39.51	8.00e-79	286.00
IUUC-Mlu-067963	Myotis lucifugus	39.15	4.00e-77	281.00
IUUC-Nfi-068288	Neosartorya fischeri	31.39	3.00e-47	182.00
IUUC-Ncr-068679	Neurospora crassa	31.53	1.00e-49	190.00
IUUC-Nle-069766	Nomascus leucogenys	36.80	3.00e-66	245.00
IUUC-Opr-070906	Ochotona princeps	39.90	5.00e-77	280.00
IUUC-Ont-071661	Oreochromis niloticus	38.01	2.00e-79	289.00
IUUC-Oan-073465	Ornithorhynchus anatinus	32.75	9.00e-51	193.00
IUUC-Ocu-074263	Oryctolagus cuniculus	39.90	1.00e-76	280.00
IUUC-Oba-075607	Oryza barthii	49.87	2.00e-98	352.00
IUUC-Obr-076581	Oryza brachyantha	47.09	3.00e-35	141.00
IUUC-Ogl-077387	Oryza glaberrima	50.12	2.00e-107	382.00
IUUC-Ogu-078323	Oryza glumaepatula	47.46	1.00e-104	372.00
IUUC-Oin-079977	Oryza indica	42.93	5.00e-78	284.00
IUUC-Olo-080857	Oryza longistaminata	49.52	6.00e-106	376.00
IUUC-Ome-081568	Oryza meridionalis	49.40	1.00e-105	376.00
IUUC-Oni-082685	Oryza nivara	48.91	3.00e-110	391.00
IUUC-Opu-084049	Oryza punctata	47.90	1.00e-105	375.00
IUUC-Oru-084348	Oryza rufipogon	48.91	3.00e-110	391.00
IUUC-Osa-086076	Oryza sativa	48.91	3.00e-110	391.00
IUUC-Ola-086991	Oryzias latipes	36.40	5.00e-76	277.00
IUUC-Oga-088991	Otolemur garnettii	39.66	2.00e-76	279.00
IUUC-Oar-090430	Ovis aries	38.33	1.00e-78	286.00
IUUC-Ptr-091359	Pan troglodytes	39.66	3.00e-76	278.00
IUUC-Pan-092499	Papio anubis	39.90	1.00e-75	276.00
IUUC-Pma-094447	Petromyzon marinus	32.61	1.00e-55	209.00
IUUC-Pfo-096430	Poecilia formosa	37.77	4.00e-77	281.00
IUUC-Pab-097649	Pongo abelii	40.15	4.00e-77	281.00
IUUC-Pop-100037	Populus trichocarpa	52.63	2.00e-128	451.00
IUUC-Pca-100317	Procavia capensis	52.55	4.00e-39	155.00
IUUC-Ppe-101999	Prunus persica	52.29	3.00e-130	457.00
IUUC-Pva-103046	Pteropus vampyrus	39.65	2.00e-77	281.00
IUUC-Pgr-103655	Puccinia graminis	27.52	3.00e-40	159.00
IUUC-Ptt-103812	Puccinia triticina	27.57	3.00e-33	135.00
IUUC-Rno-104973	Rattus norvegicus	40.63	1.00e-78	286.00
IUUC-Sce-106329	Saccharomyces cerevisiae	28.57	2.00e-36	146.00
IUUC-Sha-106941	Sarcophilus harrisii	38.66	6.00e-75	273.00
IUUC-Spo-108329	Schizosaccharomyces pombe	31.55	2.00e-58	219.00
IUUC-Smo-109659	Selaginella moellendorffii	56.32	4.00e-120	423.00
IUUC-Sit-109694	Setaria italica	50.61	2.00e-116	412.00
IUUC-Sly-111294	Solanum lycopersicum	52.87	2.00e-125	441.00
IUUC-Stu-112747	Solanum tuberosum	53.57	1.00e-127	449.00
IUUC-Sbi-114694	Sorghum bicolor	50.61	6.00e-117	413.00
IUUC-Sre-114937	Sporisorium reilianum	31.02	2.00e-49	189.00
IUUC-Ssc-116127	Sus scrofa	39.90	3.00e-77	281.00
IUUC-Tgu-117242	Taeniopygia guttata	39.59	2.00e-53	201.00
IUUC-Tru-118285	Takifugu rubripes	37.25	3.00e-84	305.00
IUUC-Tni-120368	Tetraodon nigroviridis	37.47	1.00e-82	299.00
IUUC-Tre-122106	Trichoderma reesei	30.82	1.00e-57	217.00
IUUC-Tvi-122526	Trichoderma virens	30.21	4.00e-57	215.00
IUUC-Tae-122939	Triticum aestivum	47.57	7.00e-110	390.00
IUUC-Tur-126548	Triticum urartu	47.57	8.00e-110	390.00
IUUC-Tbe-127923	Tupaia belangeri	39.90	8.00e-77	280.00
IUUC-Ttr-129308	Tursiops truncatus	37.47	1.00e-69	256.00
IUUC-Vda-129910	Verticillium dahliae	30.52	9.00e-57	214.00
IUUC-Vvi-131683	Vitis vinifera	54.39	1.00e-136	478.00
IUUC-Xtr-132118	Xenopus tropicalis	37.72	4.00e-79	288.00
IUUC-Xma-133804	Xiphophorus maculatus	38.26	4.00e-78	284.00
IUUC-Yli-134639	Yarrowia lipolytica	28.33	4.00e-43	168.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence