iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114443

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G184200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g025850	Sb06g025850.1	Sb06g025850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.5	201	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+ ++   ++ +  lpCgH++h+ C+ kw       + +  CP+C+
   Q: 201  CVICCMSYknrDR-LTKLPCGHQYHQACVAKW------LQINKVCPVCN 242
           ****999966444.777***************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MYLLGKKTGK KKVYLGYMSA PLPYAIEENY GGCFFDDDDD LAQVLQDQEI LYQLIQGSNG 60
SGSSRTHLTP SCSYGHDRTP NERKSSEDVN YELQLAVDEA LARELQEMEG KLANTSLNDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCTGC TAGGAAAGAA AACTGGAAAG AAGAAAGTGT ATCTTGGTTA TATGAGTGCC 60
CCTCTACCGT ATGCCATTGA AGAGAACTAC GGTGGGTGCT TCTTTGATGA CGACGACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g025850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001097	Aegilops tauschii	70.82	1.00e-82	298.00
IUUC-Atr-002961	Amborella trichopoda	44.49	9.00e-41	159.00
IUUC-Bdi-014232	Brachypodium distachyon	70.26	2.00e-80	291.00
IUUC-Hvu-047115	Hordeum vulgare	71.67	2.00e-80	290.00
IUUC-Lpe-050767	Leersia perrieri	75.21	2.00e-89	321.00
IUUC-Mac-064794	Musa acuminata	50.62	3.00e-63	234.00
IUUC-Oba-075838	Oryza barthii	75.63	8.00e-90	322.00
IUUC-Obr-076076	Oryza brachyantha	74.79	2.00e-86	310.00
IUUC-Ogl-077025	Oryza glaberrima	75.63	8.00e-90	322.00
IUUC-Ogu-078855	Oryza glumaepatula	75.63	3.00e-90	324.00
IUUC-Oin-079337	Oryza indica	75.21	2.00e-89	321.00
IUUC-Olo-080778	Oryza longistaminata	75.63	3.00e-90	324.00
IUUC-Ome-081351	Oryza meridionalis	74.79	3.00e-94	337.00
IUUC-Oni-082435	Oryza nivara	75.21	3.00e-93	333.00
IUUC-Opu-083140	Oryza punctata	73.95	8.00e-87	312.00
IUUC-Oru-084727	Oryza rufipogon	75.21	3.00e-89	320.00
IUUC-Osa-085427	Oryza sativa	75.63	8.00e-90	322.00
IUUC-Olu-087709	Ostreococcus lucimarinus	43.01	3.00e-17	78.60
IUUC-Pgr-103678	Puccinia graminis	44.23	9.00e-09	52.40
IUUC-Sit-110756	Setaria italica	82.59	2.00e-97	347.00
IUUC-Sly-111171	Solanum lycopersicum	38.70	7.00e-28	116.00
IUUC-Tae-124466	Triticum aestivum	73.39	2.00e-86	310.00
IUUC-Tur-126471	Triticum urartu	71.30	3.00e-78	283.00
IUUC-Vvi-130987	Vitis vinifera	42.08	1.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence