iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017552

Ensembl Protein ID

Bra040642.1-P

UniProt Accession

M4FHR4; M4FHR4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040642	Bra040642.1	Bra040642.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.5	133	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  ++ +++lp C Hvfh +C+ +w         + +CP+Cr
   Q: 133  CAICLNEFedDETLRLLPkCDHVFHPHCIDAW------LEAHVTCPVCR 175
           ********6544499999**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRRSDPLTFS GVLPIVFLLI LSAAELAAGQ GPPPPANRNE MYNNYGRVSP ALAVIVVILV 60
AALFFMGFFS IYFRSCSGLV DPGASPAAAG GVRSRGTVTA AARGLDVSVL ETFPTFVYSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAAGAT CTGACCCCTT GACTTTTTCC GGCGTTTTGC CGATTGTTTT CTTGCTAATA 60
CTATCAGCGG CGGAGCTCGC GGCGGGCCAA GGACCGCCGC CGCCTGCTAA TAGAAATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002716	Amborella trichopoda	40.34	6.00e-55	207.00
IUUC-Bol-015706	Brassica oleracea	96.63	0.00e+00	626.00
IUUC-Ggr-039921	Gaeumannomyces graminis	39.76	2.00e-10	61.20
IUUC-Gma-043536	Glycine max	45.40	7.00e-54	204.00
IUUC-Hvu-047493	Hordeum vulgare	40.53	1.00e-48	186.00
IUUC-Lpe-051270	Leersia perrieri	51.46	8.00e-44	170.00
IUUC-Mtr-058791	Medicago truncatula	49.18	2.00e-54	206.00
IUUC-Mac-064577	Musa acuminata	44.84	1.00e-53	203.00
IUUC-Oba-075528	Oryza barthii	49.70	3.00e-40	159.00
IUUC-Ome-081499	Oryza meridionalis	55.48	6.00e-40	157.00
IUUC-Pop-098838	Populus trichocarpa	46.25	1.00e-65	243.00
IUUC-Ppe-101166	Prunus persica	46.96	4.00e-65	241.00
IUUC-Sit-109787	Setaria italica	58.12	1.00e-48	186.00
IUUC-Sly-111292	Solanum lycopersicum	43.58	1.00e-51	196.00
IUUC-Stu-112669	Solanum tuberosum	41.67	5.00e-56	211.00
IUUC-Sbi-114136	Sorghum bicolor	60.00	1.00e-44	173.00
IUUC-Tni-119659	Tetraodon nigroviridis	41.33	8.00e-13	67.80
IUUC-Tca-120966	Theobroma cacao	47.69	3.00e-69	255.00
IUUC-Tae-124246	Triticum aestivum	57.46	2.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence