iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112792

Ensembl Protein ID

PGSC0003DMT400062862

UniProt Accession

M1C9N5; M1C9N5_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024470	PGSC0003DMT400062862	PGSC0003DMT400062862

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-27	95.5	173	210

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la+ +d  +l s s+D t+k+W+++++++l 
   Q: 173  HVDTVSALALsNDeSFLYSVSWDRTLKIWRTSDFKCLE 210
           99********99899*******************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MPFYQTSCSR NSSKVDSQPS FRSVPSIKSL CHDQSFSHNL ETQHQCIANL KGQNSYTSSL 60
VLGGKYLFTG SSDKEICMWE QKALTSTIDA GIIDTVIAGK GAVKSLVILA DKVFSAHQDH 120

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Nucleotide Sequence
(Fasta)

TTTTAATTTC TCTACTCCTC ACTCCTCACA AAGACAGAGA CACCAAAAAA TGCATAATAT 60
ATGATCCTCT CATAAAAACA TAGTCATATA CTAGAGTTCA GGGGAATGAA GAATGATGCC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005752	Arabidopsis lyrata	52.02	2.00e-108	384.00
IUUC-Ath-006904	Arabidopsis thaliana	55.07	3.00e-106	377.00
IUUC-Bra-017764	Brassica rapa	54.33	8.00e-105	372.00
IUUC-Gma-043330	Glycine max	56.06	2.00e-121	427.00
IUUC-Mtr-058389	Medicago truncatula	59.83	5.00e-110	390.00
IUUC-Opu-083726	Oryza punctata	45.32	2.00e-82	298.00
IUUC-Pop-099181	Populus trichocarpa	61.62	7.00e-125	439.00
IUUC-Ppe-101853	Prunus persica	63.23	4.00e-128	449.00
IUUC-Sly-111471	Solanum lycopersicum	91.77	0.00e+00	753.00
IUUC-Sbi-114568	Sorghum bicolor	44.50	9.00e-76	276.00
IUUC-Tca-121089	Theobroma cacao	62.53	7.00e-135	472.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence