iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042890

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841

Gene Name

LOC100802492; GLYMA_08G145100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G15330	GLYMA08G15330.1	GLYMA08G15330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.60e-55	188.1	58	556

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           Gl+Nl+N C++N vLQ+L+++  ++++l++    ++  ++  +++ +l+ +l++l+eel   +s++   spr+++ a++++ ++f+ ++qqDa 
   Q: 58   GLQNLQNNCFLNVVLQALASCFCFQSFLHS-VIGECGSKD-LDENMPLALALATLLEELSsfSSERVTLSPRKMMLAMSNYIPNFNLTSQQDAA 149
           9**************************999.888888765.899***************98899999*************************** PP
   S: 94   Eflaflldqleeelkk...eknkpkeeeeeedkselsde..aeekkkkknkslisdlFqgqlksqikclecdnvs.sreepfldlsl.pvpgke 180
           E + +ll  l+ee+      k ++  e + ++++ l+ +    ++++++ ++l    F+g l s+++c++c ++    +e f  l+l pv +++
   Q: 150  EAFLHLLCLLREEFGGcyaPKMSSLAEIFASNNRILTPIqsDCQSEQERWQQLFLGPFDGILGSSLTCQSCSSQIsINFEHFDCLPLsPVLSDT 243
           **************5555566666666666666666666334456666667999999**************97665*********994566666 PP
   S: 181  etkke...slqdcLesftkeeelegenkyycekckkkqe.............................................aekklklkkl 226
           +t  +   +l dcL++f  +e++e+   y+c++c ++                                               + k+l++ ++
   Q: 244  STI-RvgcTLVDCLKQFIVAEHVEN---YHCSQCWHNAAikylsimegneveleklrrcsdpeicdcrkmynldklpwsnrfshTLKQLSMARC 333
           543.2477***************96...*******55555555555555555666666666666666666666666666666669********* PP
   S: 227  PevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts..................................................... 267
           P++L+++LkR+ + +  +   k++ +++fpl Ld+ +f+t+                                                     
   Q: 334  PRILCIQLKRV-YMNVFGELVKLQGHISFPLILDVLSFMTTrlgvkkhdidvqsvplnlkynkriffpnhsdlqseistlkfsglhgakkeqik 426
           ***********.666679999******************9978888888877777777777777777777666666666666666666555555 PP
   S: 268  ....peekqke.................................................kkkYeLiavvvHsGslssGHYvayvkn....... 301
                     +                                                 +++Y+L++vv H G+++sGHY++y          
   Q: 427  sdgvI-----DdglvsstngqalhndtvfpcsgssesihsdthmqsidqvdvscnlvpqeTCSYQLVSVVEHFGKAGSGHYTVYRSVrvefsed 515
           55550.....055555555555566666666666667777777888888888888888889***********************9998888888 PP
   S: 302  ........ekgk..WllfdDskVtevkeeevleetgstaYvlfYkr 337
                   +     W++++Ds+V++v+ e+vl+   s+a +lfY+r
   Q: 516  vsddylnqT--PmrWFCISDSQVHAVSVEDVLS---SEASLLFYER 556
           877765333..266*******************...********98 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGFKENSMNW IGVTVGGLVG IVGAILALKD AKVAIPFTLP WSFATDNSSF EKSLFVPGLQ 60
NLQNNCFLNV VLQALASCFC FQSFLHSVIG ECGSKDLDEN MPLALALATL LEELSSFSSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTTGTAGT ACTAGTTTCC GTCTGTCTCC CTCTCTGCCC TCACTAGTCA CTTTCCGTTT 60
CCCCAACGCT ACGCTGGCGA GGCCAACGAA ACCTCGAATT TCAAATAAAG AAATGGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100802492

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001733	Ailuropoda melanoleuca	25.66	9.00e-18	85.10
IUUC-Atr-002510	Amborella trichopoda	40.35	1.00e-88	320.00
IUUC-Apl-003645	Anas platyrhynchos	24.78	6.00e-13	67.80
IUUC-Aly-005754	Arabidopsis lyrata	50.90	9.00e-88	317.00
IUUC-Ath-007622	Arabidopsis thaliana	45.90	8.00e-87	314.00
IUUC-Ame-010896	Astyanax mexicanus	25.37	4.00e-21	95.90
IUUC-Bta-012321	Bos taurus	26.82	7.00e-18	85.50
IUUC-Bol-015637	Brassica oleracea	45.00	6.00e-86	311.00
IUUC-Bra-016801	Brassica rapa	43.86	3.00e-85	309.00
IUUC-Cja-018826	Callithrix jacchus	25.66	4.00e-27	115.00
IUUC-Cfa-021206	Canis familiaris	25.95	1.00e-19	90.90
IUUC-Cpo-021343	Cavia porcellus	25.99	3.00e-25	110.00
IUUC-Csa-023419	Chlorocebus sabaeus	25.47	7.00e-27	115.00
IUUC-Cho-024475	Choloepus hoffmanni	26.35	3.00e-10	59.70
IUUC-Dre-027563	Danio rerio	24.30	2.00e-20	94.00
IUUC-Dno-029929	Dasypus novemcinctus	26.24	2.00e-19	90.50
IUUC-Ete-032634	Echinops telfairi	25.83	6.00e-14	72.40
IUUC-Eca-033968	Equus caballus	26.24	1.00e-18	87.40
IUUC-Fca-036525	Felis catus	26.24	2.00e-19	90.90
IUUC-Gmo-038726	Gadus morhua	23.08	1.00e-21	97.80
IUUC-Gga-040718	Gallus gallus	26.28	2.00e-16	79.70
IUUC-Gac-042645	Gasterosteus aculeatus	23.87	3.00e-20	93.20
IUUC-Ggo-045021	Gorilla gorilla	25.66	4.00e-27	115.00
IUUC-Hsa-045832	Homo sapiens	25.66	4.00e-27	115.00
IUUC-Itr-048392	Ictidomys tridecemlineatus	25.21	4.00e-18	85.90
IUUC-Loc-052611	Lepisosteus oculatus	25.78	8.00e-27	115.00
IUUC-Laf-053752	Loxodonta africana	24.44	3.00e-24	106.00
IUUC-Mcc-054892	Macaca mulatta	25.47	6.00e-27	115.00
IUUC-Meu-056673	Macropus eugenii	26.36	3.00e-12	66.20
IUUC-Mga-059543	Meleagris gallopavo	25.00	2.00e-23	103.00
IUUC-Mmr-061534	Microcebus murinus	25.76	2.00e-19	90.90
IUUC-Mmu-063673	Mus musculus	26.30	3.00e-17	83.20
IUUC-Mac-065296	Musa acuminata	47.66	1.00e-45	176.00
IUUC-Mpu-066328	Mustela putorius furo	26.09	2.00e-26	114.00
IUUC-Mlu-067938	Myotis lucifugus	26.69	3.00e-26	112.00
IUUC-Ncr-068741	Neurospora crassa	23.58	2.00e-08	54.30
IUUC-Nle-069426	Nomascus leucogenys	25.10	2.00e-21	97.10
IUUC-Ont-072248	Oreochromis niloticus	23.93	3.00e-22	99.80
IUUC-Oan-072916	Ornithorhynchus anatinus	24.86	4.00e-23	102.00
IUUC-Ocu-074459	Oryctolagus cuniculus	23.53	1.00e-19	90.90
IUUC-Ola-087429	Oryzias latipes	24.66	5.00e-21	95.50
IUUC-Oga-087981	Otolemur garnettii	25.76	3.00e-20	93.20
IUUC-Oar-089927	Ovis aries	26.16	6.00e-17	82.40
IUUC-Ptr-090878	Pan troglodytes	25.66	4.00e-27	115.00
IUUC-Pan-092698	Papio anubis	25.47	6.00e-27	115.00
IUUC-Psi-093451	Pelodiscus sinensis	25.65	1.00e-23	104.00
IUUC-Ppa-096015	Physcomitrella patens	28.61	5.00e-45	176.00
IUUC-Pfo-096096	Poecilia formosa	24.14	3.00e-22	100.00
IUUC-Pab-098676	Pongo abelii	25.28	9.00e-25	108.00
IUUC-Ppe-101898	Prunus persica	54.01	7.00e-140	490.00
IUUC-Pva-103018	Pteropus vampyrus	26.09	4.00e-25	109.00
IUUC-Rno-105708	Rattus norvegicus	24.43	7.00e-16	78.60
IUUC-Sha-106971	Sarcophilus harrisii	24.81	8.00e-25	108.00
IUUC-Smo-109191	Selaginella moellendorffii	35.32	2.00e-24	106.00
IUUC-Sly-110928	Solanum lycopersicum	45.45	3.00e-96	345.00
IUUC-Stu-112223	Solanum tuberosum	44.91	8.00e-88	317.00
IUUC-Sbi-113851	Sorghum bicolor	51.39	2.00e-37	149.00
IUUC-Ssc-116397	Sus scrofa	25.95	2.00e-18	87.40
IUUC-Tgu-117446	Taeniopygia guttata	24.95	5.00e-23	102.00
IUUC-Tru-118268	Takifugu rubripes	24.72	6.00e-22	98.60
IUUC-Tni-119735	Tetraodon nigroviridis	25.35	3.00e-15	76.60
IUUC-Tca-121660	Theobroma cacao	54.47	1.00e-140	493.00
IUUC-Tvi-122277	Trichoderma virens	24.34	2.00e-07	50.80
IUUC-Ttr-129273	Tursiops truncatus	26.32	2.00e-25	110.00
IUUC-Vvi-131177	Vitis vinifera	53.40	3.00e-143	501.00
IUUC-Xtr-132374	Xenopus tropicalis	25.89	6.00e-24	105.00
IUUC-Xma-133267	Xiphophorus maculatus	23.83	3.00e-22	99.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence