iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e++k++     l CgH fh +C++ w       +++ +CP+C+
   Q: 592  CCVCQEEYKEEeeIGRLECGHDFHSQCIKEW------LKQKNLCPICK 633
           ********5553355588*************......99********6 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MQGERASLGS LSKALNFERG STSSNAVVDQ QIRWENLHNY GDNDLQDYMS SAADTNPTFA 60
NSVYHEKRGL QRFNIGEASS SGTKNEGASL TEQWKGIGRF EEQRNDKLEL SPLFVQPSNG 120

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Nucleotide Sequence
(Fasta)

TAATAATCTT CTCTCCGGAT TCTATTCTCA TTTGGTTTGT GTGCTTTGCT TTCGCTTTCC 60
TCAATTCTCT TCTTCTTCAT TATTTTTGCC TTTTACCTCT TTTCTCTGCA ATCGGTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005944	Arabidopsis lyrata	86.42	0.00e+00	1076.00
IUUC-Bol-015592	Brassica oleracea	61.28	0.00e+00	650.00
IUUC-Bra-017092	Brassica rapa	55.52	2.00e-146	511.00
IUUC-Gma-042748	Glycine max	36.81	1.00e-87	317.00
IUUC-Pop-099945	Populus trichocarpa	35.57	3.00e-94	338.00
IUUC-Ppe-101513	Prunus persica	38.83	2.00e-101	362.00
IUUC-Pte-104037	Pyrenophora teres	38.71	3.00e-08	52.40
IUUC-Pyt-104680	Pyrenophora triticirepentis	34.29	2.00e-08	52.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence