iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098844

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_793908; POPTR_0002s00900g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s00900	POPTR_0002s00900.1	POPTR_0002s00900.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	62.84	0.00e+00	718.00	IUUC-Ath-007380

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MFSERLTGEA SLRRELEALS VSQRLVRSVS QKLRKKNNLR GEGEEEDDSR GVSLKCLTLY 60
GMGGGCKVGA DTGEEFGDPS GRRRSCSASE EGKGYKPICG NEETGFDCFS YGVREKFWKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCTCTGCTA ATATCTACTC TCCACTGAGC TCAAGTTATC TACCATGTCC AGACTCTGCA 60
GAAAAAAAAG AGGTGAAAAA CAAAAGGGAG AATGACAAAT GGAAAAGAAA AGCGCTGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0880--Kelch repeat
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR001810--F-box_dom
IPR015916--Gal_Oxidase_b-propeller
IPR006652--Kelch_1

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF01344--Kelch_1

SMART

SM00256--FBOX

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0002s00900g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000640	Aegilops tauschii	47.06	6.00e-74	270.00
IUUC-Atr-002933	Amborella trichopoda	48.58	9.00e-148	516.00
IUUC-Aly-005496	Arabidopsis lyrata	63.12	0.00e+00	757.00
IUUC-Ath-007380	Arabidopsis thaliana	62.84	0.00e+00	721.00
IUUC-Bdi-014028	Brachypodium distachyon	48.89	2.00e-104	372.00
IUUC-Bol-016009	Brassica oleracea	58.63	0.00e+00	625.00
IUUC-Bra-017933	Brassica rapa	59.18	0.00e+00	632.00
IUUC-Gma-043263	Glycine max	72.85	0.00e+00	825.00
IUUC-Lpe-051197	Leersia perrieri	45.47	6.00e-72	264.00
IUUC-Mtr-058516	Medicago truncatula	71.79	0.00e+00	850.00
IUUC-Oba-075003	Oryza barthii	50.43	3.00e-55	208.00
IUUC-Ogl-077287	Oryza glaberrima	45.32	2.00e-74	272.00
IUUC-Oin-079081	Oryza indica	54.70	1.00e-53	202.00
IUUC-Ome-082005	Oryza meridionalis	45.53	9.00e-82	297.00
IUUC-Opu-083845	Oryza punctata	46.41	3.00e-86	311.00
IUUC-Olu-087831	Ostreococcus lucimarinus	40.00	2.40e-01	31.60
IUUC-Ppe-101306	Prunus persica	78.87	0.00e+00	978.00
IUUC-Ptt-103897	Puccinia triticina	34.69	2.50e-01	30.00
IUUC-Sly-111848	Solanum lycopersicum	69.76	0.00e+00	853.00
IUUC-Stu-112855	Solanum tuberosum	69.76	0.00e+00	851.00
IUUC-Sbi-114836	Sorghum bicolor	49.22	5.00e-107	380.00
IUUC-Tca-121490	Theobroma cacao	81.79	0.00e+00	967.00
IUUC-Tur-126869	Triticum urartu	42.75	3.00e-58	218.00
IUUC-Vda-129824	Verticillium dahliae	45.95	6.00e-02	31.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence