iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112228

Ensembl Protein ID

PGSC0003DMT400095861

UniProt Accession

M1DX72; M1DX72_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400045432	PGSC0003DMT400095861	PGSC0003DMT400095861

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-28	99.9	155	225

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++f+CpI+le+M++Pv+++sG+tydr+sI kw++ g++tcP+t+++lt+ dlvPn +l+ li+++c++n++
   Q: 155  DDFRCPITLEIMSEPVTIASGHTYDRASILKWFRAGNSTCPKTGERLTSIDLVPNFALKVLIKQYCSANGI 225
           79*****************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MLARAVAVAL DVLPLKEMDV SVEGQEVVEF VRNQAVKLKF EVEMDDGRMQ VNVLKILDQL 60
ENEVIPETRD LKRVLDSLGI TRWSACNREV KFLDNEMLLE GNTEEKRDMG ILSSLMGFMI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGCAA GAGCTGTTGC TGTGGCACTT GATGTTCTTC CTTTGAAGGA AATGGATGTT 60
TCTGTGGAGG GTCAAGAAGT GGTTGAGTTT GTGAGGAATC AAGCTGTTAA GTTGAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:107062219

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Obr-076845	Oryza brachyantha	35.49	1.00e-59	223.00
IUUC-Ppe-101772	Prunus persica	59.96	2.00e-160	557.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence