iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G04090	BRADI1G04090.1	BRADI1G04090.1
BRADI1G04090	BRADI1G04090.2	BRADI1G04090.2
BRADI1G04090	BRADI1G04090.3	BRADI1G04090.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-09	38.2	178	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++ +p+++ lM d ++l++G++y  + + +++ + +  c +++qp+te+++ Pnl+lr  +qa++ e++
   Q: 178  HLSDPLTGILMDDATILSCGHSYGSNGM-QHIYRMKA-CGKCGQPITENSIRPNLALRLAVQAFRREEE 244
           689*************************.67888887.**************************99876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASPPGPRAH RPVSSSRGPL SPFPAAEAQF PSRAAAAAGP FLRQHHLPVG DSDGGDSVDE 60
FDEDEDGMDD EDEEEEDRAE LVGRAAAGSS QQRRGSFPAG IRQTTIGENG VRQIQAEQQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCTC CTCCGGGCCC GCGAGCCCAC CGCCCGGTCT CCTCCTCGAG GGGCCCGCTC 60
TCGCCGTTCC CAGCCGCGGA AGCCCAGTTC CCCTCCCGCG CCGCCGCCGC CGCCGGTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013083--Znf_RING/FYVE/PHD

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000192	Aegilops tauschii	69.74	1.00e-126	445.00
IUUC-Atr-002682	Amborella trichopoda	60.78	7.00e-62	230.00
IUUC-Aly-005602	Arabidopsis lyrata	58.56	4.00e-55	207.00
IUUC-Ath-007585	Arabidopsis thaliana	52.43	2.00e-56	211.00
IUUC-Bol-015470	Brassica oleracea	55.17	6.00e-56	210.00
IUUC-Bra-017015	Brassica rapa	50.00	2.00e-58	219.00
IUUC-Gma-042808	Glycine max	63.45	7.00e-66	243.00
IUUC-Hvu-047241	Hordeum vulgare	92.96	1.00e-36	143.00
IUUC-Mtr-058650	Medicago truncatula	57.08	4.00e-65	241.00
IUUC-Mac-065387	Musa acuminata	55.40	2.00e-80	292.00
IUUC-Oba-075942	Oryza barthii	85.87	1.00e-132	465.00
IUUC-Obr-076573	Oryza brachyantha	82.90	2.00e-127	447.00
IUUC-Ogl-077795	Oryza glaberrima	82.21	8.00e-130	455.00
IUUC-Ogu-078142	Oryza glumaepatula	86.25	1.00e-133	468.00
IUUC-Ome-081788	Oryza meridionalis	74.35	9.00e-109	386.00
IUUC-Oni-082512	Oryza nivara	86.49	2.00e-129	455.00
IUUC-Opu-083147	Oryza punctata	74.86	1.00e-135	474.00
IUUC-Oru-085135	Oryza rufipogon	86.49	2.00e-129	455.00
IUUC-Ppa-095972	Physcomitrella patens	51.96	2.00e-48	186.00
IUUC-Pop-099896	Populus trichocarpa	65.80	5.00e-68	250.00
IUUC-Ppe-101532	Prunus persica	62.38	5.00e-68	251.00
IUUC-Smo-109655	Selaginella moellendorffii	52.30	4.00e-43	167.00
IUUC-Sly-111788	Solanum lycopersicum	57.47	2.00e-66	245.00
IUUC-Stu-112107	Solanum tuberosum	63.54	5.00e-67	247.00
IUUC-Sbi-113910	Sorghum bicolor	73.80	6.00e-103	366.00
IUUC-Tca-121309	Theobroma cacao	62.05	1.00e-64	239.00
IUUC-Tae-125313	Triticum aestivum	76.30	1.00e-133	468.00
IUUC-Vvi-131465	Vitis vinifera	61.29	3.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence