iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108764

Ensembl Protein ID

EFJ28659

UniProt Accession

D8RGW2; D8RGW2_SELML

Genbank Protein ID

EFJ28659.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377579

Gene Name

SELMODRAFT_441144

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_441144	EFJ28659	EFJ28659

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.10e-13	48.9	475	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +Cg  g+    l++C+ C  ++H +C++ s +++lp+ + w+Cp+C+
   Q: 475  CVLCGMDGN----LICCDGCPAAYHSRCVGVS-KSTLPEGD-WYCPECT 517
           999999999....*******************.*******7.******7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEEEEDNAEL VGRSVRKYFQ GHGYFGGTVV AYDKSSKYFR VKYADGDREE VELHELREIL 60
VDCGSDSGAP PKRSRGRPRK IADANGTNGE LIQAMNYKDL VAWEVAKALK RHRPESEPGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGG AGGAGGACAA TGCCGAGCTC GTGGGAAGAT CGGTGAGGAA GTATTTCCAG 60
GGGCATGGAT ATTTCGGTGG GACAGTGGTG GCCTATGACA AATCGAGCAA ATATTTCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR018501--DDT_dom
IPR000116--HMGA
IPR002219--PE/DAG-bd
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS50081--ZF_DAG_PE_2
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

PRINTS

PR00930--HIGHMOBLTYIY

SMART

SM00384--AT_hook
SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0035556--P:intracellular signal transduction
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

smo:SELMODRAFT_441144

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	27.14	2.00e-65	244.00
IUUC-Aly-006239	Arabidopsis lyrata	31.27	7.00e-139	488.00
IUUC-Ath-007130	Arabidopsis thaliana	31.04	1.00e-136	480.00
IUUC-Bol-016165	Brassica oleracea	31.33	7.00e-137	481.00
IUUC-Bra-017694	Brassica rapa	30.43	4.00e-134	472.00
IUUC-Cho-024758	Choloepus hoffmanni	29.07	6.00e-12	67.40
IUUC-Fox-038014	Fusarium oxysporum	42.00	2.00e-10	60.80
IUUC-Gma-043651	Glycine max	29.73	1.00e-132	468.00
IUUC-Mtr-058355	Medicago truncatula	29.73	2.00e-121	429.00
IUUC-Mac-065252	Musa acuminata	30.18	5.00e-76	279.00
IUUC-Obr-076085	Oryza brachyantha	31.23	1.00e-106	381.00
IUUC-Oin-079426	Oryza indica	36.41	3.00e-62	233.00
IUUC-Oni-082756	Oryza nivara	36.41	3.00e-62	233.00
IUUC-Olu-087633	Ostreococcus lucimarinus	34.78	8.00e-07	48.10
IUUC-Pan-092346	Papio anubis	40.32	2.00e-11	63.50
IUUC-Pop-099219	Populus trichocarpa	29.85	5.00e-81	296.00
IUUC-Pca-100922	Procavia capensis	40.32	4.00e-11	64.70
IUUC-Sly-111813	Solanum lycopersicum	31.45	1.00e-132	467.00
IUUC-Tae-125025	Triticum aestivum	27.27	2.00e-67	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence