iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099967

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_1093028; POPTR_0010s24160g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s24160	POPTR_0010s24160.1	POPTR_0010s24160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-08	34.6	87	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl ++  kd +++lp CgH fh +C+ +w       +++ +CP Cr
   Q: 87   CTVCLAEYhgKDILRILPyCGHSFHVTCIDMW------LQQHSTCPMCR 129
           99**999988776999****************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMASGINLVM TVIGFSVSTM FIVFVCTRLI CARIQLNASR RSFRIASRSD LSMLERGLHG 60
LEPVVIASFP TKKYNDKLFS ASEDAQCTVC LAEYHGKDIL RILPYCGHSF HVTCIDMWLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTAGAT CCCGTAATCT TCCATAAATC TCTTCCCTGA AACTCTCCCC ACCTCCCCTG 60
CCCTCCCTCC CCTCTCTCTC GACACCAAAC ATGAGCTCAT CTTCTCTCAC TAAAAGAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s24160g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002798	Amborella trichopoda	66.49	2.00e-66	245.00
IUUC-Bdi-014707	Brachypodium distachyon	37.14	9.00e-33	132.00
IUUC-Gma-043344	Glycine max	63.72	7.00e-87	312.00
IUUC-Lpe-050686	Leersia perrieri	44.74	1.00e-33	135.00
IUUC-Mtr-058009	Medicago truncatula	56.83	5.00e-74	270.00
IUUC-Mac-065561	Musa acuminata	68.29	8.00e-63	233.00
IUUC-Ogl-077876	Oryza glaberrima	39.11	2.00e-33	135.00
IUUC-Ogu-078546	Oryza glumaepatula	50.39	3.00e-34	137.00
IUUC-Opu-083702	Oryza punctata	50.36	5.00e-36	143.00
IUUC-Olu-087632	Ostreococcus lucimarinus	50.00	2.00e-10	57.40
IUUC-Ppe-101855	Prunus persica	72.81	4.00e-99	353.00
IUUC-Sly-110875	Solanum lycopersicum	61.23	2.00e-68	251.00
IUUC-Stu-112465	Solanum tuberosum	62.11	2.00e-70	257.00
IUUC-Sbi-114099	Sorghum bicolor	48.25	5.00e-29	120.00
IUUC-Tca-121445	Theobroma cacao	71.49	2.00e-96	344.00
IUUC-Tae-122765	Triticum aestivum	44.12	1.00e-28	118.00
IUUC-Vvi-131455	Vitis vinifera	70.33	2.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence