iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006103

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348717

Gene Name

ATPUB14; ARALYDRAFT_906899

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_502603.1	scaffold_502603.1	scaffold_502603.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-32	111.9	247	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslelM+dPv++++G+ty+rssI+kwl+ g+ktcP+ +++l +  l+Pn++l++li  wce+n++
   Q: 247  IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGI 319
           8*********************************************************************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGLTNCSHEE LMSRLVDSVK EISGFSSSRG FIGKIQGDLV RRITLLSPFF EELIDVNVEL 60
KEDQIAGFEV MRIALDSSLE LFRSVHGGSK LFQIFDRDSL VLKFHDMTVE IEAALSQIPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGGACAGC AAAATTCAAG GGATGGGATT AACGAATTGT TCCCACGAGG AGTTAATGAG 60
TCGACTCGTT GACTCGGTGA AAGAAATATC TGGGTTTTCA TCTTCAAGGG GTTTTATTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_906899

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	61.40	0.00e+00	705.00
IUUC-Ath-006994	Arabidopsis thaliana	96.52	0.00e+00	1175.00
IUUC-Bdi-014691	Brachypodium distachyon	62.18	0.00e+00	647.00
IUUC-Bol-016160	Brassica oleracea	87.38	0.00e+00	1072.00
IUUC-Bra-016727	Brassica rapa	87.70	0.00e+00	1082.00
IUUC-Gma-043496	Glycine max	66.03	0.00e+00	811.00
IUUC-Hvu-047272	Hordeum vulgare	62.31	0.00e+00	632.00
IUUC-Lpe-051517	Leersia perrieri	61.99	3.00e-179	620.00
IUUC-Mtr-057651	Medicago truncatula	65.33	0.00e+00	776.00
IUUC-Mac-065604	Musa acuminata	55.15	2.00e-172	598.00
IUUC-Oba-075750	Oryza barthii	61.42	0.00e+00	633.00
IUUC-Obr-076793	Oryza brachyantha	61.83	9.00e-177	612.00
IUUC-Ogl-077380	Oryza glaberrima	61.61	0.00e+00	634.00
IUUC-Ogu-078219	Oryza glumaepatula	61.05	0.00e+00	629.00
IUUC-Oin-079724	Oryza indica	57.40	0.00e+00	642.00
IUUC-Ome-081932	Oryza meridionalis	61.42	0.00e+00	632.00
IUUC-Oni-082439	Oryza nivara	61.80	0.00e+00	635.00
IUUC-Opu-083837	Oryza punctata	57.24	0.00e+00	642.00
IUUC-Oru-085172	Oryza rufipogon	61.61	0.00e+00	633.00
IUUC-Osa-085991	Oryza sativa	61.61	0.00e+00	634.00
IUUC-Pop-099229	Populus trichocarpa	68.48	0.00e+00	828.00
IUUC-Ppe-101965	Prunus persica	64.44	0.00e+00	767.00
IUUC-Sit-110461	Setaria italica	63.41	3.00e-174	603.00
IUUC-Sly-111662	Solanum lycopersicum	66.34	0.00e+00	783.00
IUUC-Stu-111979	Solanum tuberosum	65.86	0.00e+00	776.00
IUUC-Sbi-114550	Sorghum bicolor	57.71	0.00e+00	634.00
IUUC-Tca-121269	Theobroma cacao	68.53	0.00e+00	822.00
IUUC-Tae-125788	Triticum aestivum	62.36	0.00e+00	642.00
IUUC-Tur-126276	Triticum urartu	59.13	2.00e-171	594.00
IUUC-Vvi-131729	Vitis vinifera	68.29	0.00e+00	802.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence