iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099213

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_819318; POPTR_0006s21300g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s21300	POPTR_0006s21300.1	POPTR_0006s21300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.30e-07	30.9	235	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl..qkw....pglknssskefrCPlCr 46
           CaiCle  ++ p+ l+CgH+f++ C          +   + +s +++CP+Cr
   Q: 235  CAICLETVFN-PYALSCGHLFCKLCAcsA-AfvlmFEGLKTASSNAKCPICR 284
           **********.**************5432.23555455567999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKFGDTFMQY LQGDQTGNLV KCAHVEYKRL NEVLKNCRSQ GSASASCKNE QQKDEGNNEL 60
SSGLSQFCHC ESCPLCDQIF FSELMREASH IAGCFSSRVR HLLHLHVARG IQRYKLRLRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTTTG GAGACACGTT CATGCAGTAT TTGCAAGGAG ATCAAACAGG GAATTTGGTT 60
AAATGTGCTC ATGTTGAGTA CAAAAGACTC AATGAAGTCT TAAAAAACTG CAGAAGCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR004331--SPX_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51382--SPX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0006s21300g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000827	Aegilops tauschii	59.25	1.00e-88	319.00
IUUC-Atr-003086	Amborella trichopoda	61.97	2.00e-101	361.00
IUUC-Aly-006118	Arabidopsis lyrata	59.03	1.00e-89	322.00
IUUC-Bdi-014689	Brachypodium distachyon	60.68	6.00e-90	323.00
IUUC-Cja-019010	Callithrix jacchus	47.17	1.00e-07	50.80
IUUC-Cfa-021228	Canis familiaris	40.74	5.00e-06	45.10
IUUC-Cne-027043	Cryptococcus neoformans	55.56	1.00e-05	44.30
IUUC-Gma-042739	Glycine max	63.19	3.00e-103	367.00
IUUC-Lpe-051499	Leersia perrieri	59.45	6.00e-94	337.00
IUUC-Mtr-057657	Medicago truncatula	65.03	4.00e-106	377.00
IUUC-Mvi-060296	Microbotryum violaceum	50.00	8.00e-05	42.40
IUUC-Mac-065655	Musa acuminata	64.01	1.00e-107	382.00
IUUC-Oba-075404	Oryza barthii	60.55	5.00e-92	330.00
IUUC-Obr-076671	Oryza brachyantha	58.62	4.00e-91	327.00
IUUC-Ogl-076954	Oryza glaberrima	60.55	5.00e-92	330.00
IUUC-Ogu-078560	Oryza glumaepatula	60.21	2.00e-93	335.00
IUUC-Oin-079323	Oryza indica	60.55	2.00e-92	331.00
IUUC-Olo-081014	Oryza longistaminata	60.55	5.00e-94	337.00
IUUC-Oni-082375	Oryza nivara	60.55	1.00e-92	332.00
IUUC-Oru-085144	Oryza rufipogon	60.55	1.00e-92	332.00
IUUC-Osa-085862	Oryza sativa	60.55	2.00e-92	331.00
IUUC-Ola-087079	Oryzias latipes	38.89	6.00e-07	48.50
IUUC-Ppe-102082	Prunus persica	65.73	3.00e-101	360.00
IUUC-Sit-110739	Setaria italica	58.70	2.00e-90	325.00
IUUC-Sly-111157	Solanum lycopersicum	60.98	3.00e-100	357.00
IUUC-Stu-112383	Solanum tuberosum	61.25	5.00e-100	357.00
IUUC-Tca-121172	Theobroma cacao	69.69	2.00e-119	421.00
IUUC-Tae-125064	Triticum aestivum	60.98	2.00e-92	332.00
IUUC-Tur-126362	Triticum urartu	58.90	2.00e-87	315.00
IUUC-Vvi-131073	Vitis vinifera	70.73	9.00e-116	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence