iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-102057

Ensembl Protein ID

EMJ06192

UniProt Accession

M5VXM1; M5VXM1_PRUPE

Genbank Protein ID

EMJ06192.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KB639090

Gene Name

PUB13; PRUPE_ppa003509mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa003509mg	EMJ06192	EMJ06192

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-35	119.7	161	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+rs+Iekwl+ g+ tcP+t+q l++++l+Pn++lr+li +wce+n++
   Q: 161  IPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQNLSNTTLTPNYALRSLIAQWCEANGI 233
           89********************************************************************986 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MKKFHEVTSQ LEQALSGISY ENLDISDEVK EQVELVLAQF RRANGRFDSP DVELYEDLLS 60
LYSRNDAATD PAVLKRLVEK LELAGIAELT QESLALHEMV TSSGGDPGES IEKMSMLLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCAGAACCA AAAACCTTCT GAAACGCTGC GTTTCAGCTG AGATCGGCGA AGACGAGCTA 60
TGGAGAAAGA CAAAGTCGCT CTGGTGCAGA GCCTGATCGA CCTAGTCAAC GAAATAGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pper:PRUPE_ppa003509mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	67.90	0.00e+00	711.00
IUUC-Atr-002932	Amborella trichopoda	68.11	0.00e+00	687.00
IUUC-Aly-005681	Arabidopsis lyrata	69.72	0.00e+00	767.00
IUUC-Ath-007618	Arabidopsis thaliana	69.67	0.00e+00	767.00
IUUC-Bdi-014829	Brachypodium distachyon	67.16	0.00e+00	705.00
IUUC-Bol-015254	Brassica oleracea	73.22	0.00e+00	765.00
IUUC-Bra-017857	Brassica rapa	72.47	0.00e+00	749.00
IUUC-Gma-043064	Glycine max	77.41	0.00e+00	878.00
IUUC-Hvu-047052	Hordeum vulgare	67.59	0.00e+00	671.00
IUUC-Lpe-051065	Leersia perrieri	69.07	0.00e+00	725.00
IUUC-Mtr-058332	Medicago truncatula	78.07	0.00e+00	844.00
IUUC-Mac-065438	Musa acuminata	63.82	0.00e+00	639.00
IUUC-Oba-075101	Oryza barthii	68.33	0.00e+00	715.00
IUUC-Obr-076784	Oryza brachyantha	68.89	0.00e+00	724.00
IUUC-Ogl-077638	Oryza glaberrima	68.33	0.00e+00	716.00
IUUC-Ogu-078222	Oryza glumaepatula	68.33	0.00e+00	716.00
IUUC-Oin-079280	Oryza indica	68.15	0.00e+00	716.00
IUUC-Olo-080852	Oryza longistaminata	68.15	0.00e+00	713.00
IUUC-Ome-081164	Oryza meridionalis	68.52	0.00e+00	719.00
IUUC-Oni-083018	Oryza nivara	68.15	0.00e+00	715.00
IUUC-Opu-083626	Oryza punctata	68.52	0.00e+00	716.00
IUUC-Oru-084907	Oryza rufipogon	68.15	0.00e+00	715.00
IUUC-Osa-085946	Oryza sativa	65.06	0.00e+00	677.00
IUUC-Ppa-095383	Physcomitrella patens	51.48	1.00e-152	532.00
IUUC-Pop-098809	Populus trichocarpa	80.39	0.00e+00	906.00
IUUC-Smo-109443	Selaginella moellendorffii	53.36	9.00e-151	526.00
IUUC-Sit-110369	Setaria italica	67.53	0.00e+00	695.00
IUUC-Sly-111594	Solanum lycopersicum	75.83	0.00e+00	858.00
IUUC-Stu-112876	Solanum tuberosum	74.48	0.00e+00	821.00
IUUC-Sbi-113843	Sorghum bicolor	66.73	0.00e+00	676.00
IUUC-Tca-121745	Theobroma cacao	84.39	0.00e+00	902.00
IUUC-Tae-123188	Triticum aestivum	67.96	0.00e+00	674.00
IUUC-Tur-126448	Triticum urartu	68.27	0.00e+00	713.00
IUUC-Tme-127103	Tuber melanosporum	33.74	5.00e-18	85.10
IUUC-Vvi-131752	Vitis vinifera	82.53	0.00e+00	876.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence