iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006545

Ensembl Protein ID

scaffold_601268.1

UniProt Accession

D7M4I7; D7M4I7_ARALL

Genbank Protein ID

EFH47782.1

Protein Name

Ran GTPase binding protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_909211

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_601268.1	scaffold_601268.1	scaffold_601268.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/HECT	36.36	2.00e-47	189.00	IUUC-Hsa-046516

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSRNGRMASD LSRAGPVERD IEQAIIALKK GAYLLKYGRR GKPKFCPFRL SNDETVLIWF 60
SGNEEKHLKL SHVSRIISGQ RTPIFQRYPR PEKEYQSFSL IYSERSLDVI CKDKDEAEVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCGTTGAG ATTTTTGTGT ATGTCGAGAA ACGGAAGGAT GGCTTCGGAT CTTAGTAGAG 60
CTGGTCCTGT GGAGAGAGAT ATCGAGCAGG TTGTTGTTAT CTTCTTCTTC ATTTATCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR013591--Brevis_radix_dom
IPR027988--BRX_N
IPR011993--PH_dom-like
IPR001849--PH_domain
IPR009091--RCC1/BLIP-II
IPR000408--Reg_chr_condens
IPR000306--Znf_FYVE
IPR017455--Znf_FYVE-rel
IPR011011--Znf_FYVE_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51514--BRX
PS00626--RCC1_2
PS50012--RCC1_3
PS50178--ZF_FYVE

Pfam

PF08381--BRX
PF13713--BRX_N
PF01363--FYVE
PF16457--PH_12
PF00415--RCC1

PRINTS

PR00633--RCCNDNSATION

SMART

SM00064--FYVE

Gene Ontology

GO:0005886--C:plasma membrane
GO:0046872--F:metal ion binding

KEGG

aly:ARALYDRAFT_909211

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001830	Ailuropoda melanoleuca	36.58	4.00e-51	198.00
IUUC-Atr-003065	Amborella trichopoda	65.38	0.00e+00	1304.00
IUUC-Apl-003461	Anas platyrhynchos	36.26	4.00e-53	204.00
IUUC-Aca-004452	Anolis carolinensis	37.24	2.00e-52	202.00
IUUC-Bta-013213	Bos taurus	36.58	5.00e-51	198.00
IUUC-Bdi-014093	Brachypodium distachyon	38.49	2.00e-176	612.00
IUUC-Bol-015203	Brassica oleracea	94.52	0.00e+00	1898.00
IUUC-Bra-016737	Brassica rapa	92.98	0.00e+00	1796.00
IUUC-Cja-019298	Callithrix jacchus	36.87	2.00e-51	199.00
IUUC-Cfa-021213	Canis familiaris	36.28	6.00e-51	197.00
IUUC-Cpo-021674	Cavia porcellus	36.28	8.00e-51	196.00
IUUC-Cre-023014	Chlamydomonas reinhardtii	34.04	1.00e-47	182.00
IUUC-Csa-023341	Chlorocebus sabaeus	36.28	2.00e-51	199.00
IUUC-Cho-024387	Choloepus hoffmanni	33.93	1.00e-36	150.00
IUUC-Cin-025709	Ciona intestinalis	29.68	6.00e-34	140.00
IUUC-Dno-029988	Dasypus novemcinctus	36.87	3.00e-51	199.00
IUUC-Dme-032171	Drosophila melanogaster	34.12	3.00e-41	165.00
IUUC-Eca-033754	Equus caballus	36.15	8.00e-50	194.00
IUUC-Eeu-034859	Erinaceus europaeus	32.58	7.00e-38	154.00
IUUC-Fca-035900	Felis catus	36.58	3.00e-51	198.00
IUUC-Fal-037034	Ficedula albicollis	36.95	1.00e-51	200.00
IUUC-Gga-040321	Gallus gallus	36.66	9.00e-53	204.00
IUUC-Gac-042444	Gasterosteus aculeatus	34.96	2.00e-53	205.00
IUUC-Gma-043808	Glycine max	46.09	5.00e-162	564.00
IUUC-Hsa-046516	Homo sapiens	36.28	2.00e-51	199.00
IUUC-Hvu-047529	Hordeum vulgare	71.51	0.00e+00	1268.00
IUUC-Itr-048914	Ictidomys tridecemlineatus	36.50	5.00e-50	192.00
IUUC-Lch-049903	Latimeria chalumnae	36.87	7.00e-52	201.00
IUUC-Lpe-051482	Leersia perrieri	57.84	3.00e-174	605.00
IUUC-Loc-052805	Lepisosteus oculatus	36.10	3.00e-54	208.00
IUUC-Laf-053426	Loxodonta africana	36.58	4.00e-51	198.00
IUUC-Mcc-055826	Macaca mulatta	36.28	3.00e-51	199.00
IUUC-Meu-056660	Macropus eugenii	32.01	3.00e-37	152.00
IUUC-Mtr-058277	Medicago truncatula	35.80	3.00e-51	195.00
IUUC-Mvi-060436	Microbotryum violaceum	26.75	1.00e-09	57.80
IUUC-Mmr-061512	Microcebus murinus	36.58	2.00e-51	199.00
IUUC-Mdo-062177	Monodelphis domestica	36.28	7.00e-51	197.00
IUUC-Mmu-064373	Mus musculus	36.36	1.00e-51	200.00
IUUC-Mpu-066148	Mustela putorius furo	36.58	3.00e-51	199.00
IUUC-Mlu-067680	Myotis lucifugus	36.58	7.00e-51	197.00
IUUC-Nle-069633	Nomascus leucogenys	35.40	4.00e-45	178.00
IUUC-Opr-070990	Ochotona princeps	33.14	3.00e-38	155.00
IUUC-Ont-072285	Oreochromis niloticus	35.11	3.00e-45	179.00
IUUC-Oan-073157	Ornithorhynchus anatinus	35.65	5.00e-50	194.00
IUUC-Ocu-074841	Oryctolagus cuniculus	36.58	3.00e-51	198.00
IUUC-Oba-075573	Oryza barthii	45.27	0.00e+00	705.00
IUUC-Obr-076107	Oryza brachyantha	36.32	3.00e-168	585.00
IUUC-Ogl-077193	Oryza glaberrima	45.32	0.00e+00	707.00
IUUC-Ogu-078817	Oryza glumaepatula	45.27	0.00e+00	705.00
IUUC-Oin-079609	Oryza indica	38.39	1.00e-146	513.00
IUUC-Olo-080629	Oryza longistaminata	45.27	0.00e+00	707.00
IUUC-Ome-081686	Oryza meridionalis	44.81	0.00e+00	717.00
IUUC-Oni-082049	Oryza nivara	34.97	4.00e-48	184.00
IUUC-Opu-084137	Oryza punctata	55.73	9.00e-175	607.00
IUUC-Oru-085013	Oryza rufipogon	45.27	0.00e+00	705.00
IUUC-Osa-085597	Oryza sativa	45.38	0.00e+00	707.00
IUUC-Ola-086308	Oryzias latipes	33.15	2.00e-50	196.00
IUUC-Olu-087836	Ostreococcus lucimarinus	32.42	2.00e-22	98.60
IUUC-Oga-088459	Otolemur garnettii	36.28	5.00e-51	197.00
IUUC-Oar-089888	Ovis aries	36.58	5.00e-51	198.00
IUUC-Ptr-091114	Pan troglodytes	36.28	3.00e-51	198.00
IUUC-Pan-092442	Papio anubis	36.28	2.00e-51	199.00
IUUC-Psi-093833	Pelodiscus sinensis	36.36	3.00e-52	201.00
IUUC-Pma-094275	Petromyzon marinus	30.70	7.00e-34	139.00
IUUC-Ppa-095790	Physcomitrella patens	33.80	7.00e-52	197.00
IUUC-Pfo-096464	Poecilia formosa	35.05	2.00e-49	192.00
IUUC-Pab-097760	Pongo abelii	36.28	3.00e-51	197.00
IUUC-Pop-099121	Populus trichocarpa	77.76	0.00e+00	1561.00
IUUC-Ppe-101345	Prunus persica	50.26	0.00e+00	922.00
IUUC-Pva-102950	Pteropus vampyrus	36.58	5.00e-51	197.00
IUUC-Rno-104892	Rattus norvegicus	36.36	1.00e-51	200.00
IUUC-Smo-108827	Selaginella moellendorffii	58.92	0.00e+00	1092.00
IUUC-Sit-109917	Setaria italica	44.80	0.00e+00	677.00
IUUC-Sly-110961	Solanum lycopersicum	75.37	0.00e+00	1308.00
IUUC-Stu-112166	Solanum tuberosum	52.78	0.00e+00	863.00
IUUC-Sbi-114352	Sorghum bicolor	53.74	4.00e-135	475.00
IUUC-Ssc-116391	Sus scrofa	36.58	4.00e-51	198.00
IUUC-Tgu-116554	Taeniopygia guttata	36.84	1.00e-53	206.00
IUUC-Tsy-119619	Tarsius syrichta	33.54	9.00e-39	155.00
IUUC-Tca-121094	Theobroma cacao	57.77	0.00e+00	1105.00
IUUC-Tae-124157	Triticum aestivum	39.13	0.00e+00	674.00
IUUC-Tur-126300	Triticum urartu	68.77	0.00e+00	1144.00
IUUC-Tbe-127640	Tupaia belangeri	33.54	1.00e-38	154.00
IUUC-Ttr-128542	Tursiops truncatus	36.58	6.00e-51	197.00
IUUC-Xtr-131933	Xenopus tropicalis	36.95	6.00e-53	204.00
IUUC-Xma-134135	Xiphophorus maculatus	35.47	2.00e-49	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence