iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111511

Ensembl Protein ID

Solyc09g025270.2.1

UniProt Accession

K4CSI8; K4CSI8_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g025270.2	Solyc09g025270.2.1	Solyc09g025270.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-30	105.9	205	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p++f+Cp+slelM +Pv+++sG+ty+++sI+kwl++g +tcP t+q l++++l+Pn+t+++li++wce n++
   Q: 205  KIPPYFRCPLSLELMVNPVIIASGQTYEKTSIQKWLDHGLTTCPRTNQALAHSNLIPNYTVKALIENWCEVNKV 278
           59********************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MPGQKNYKNI ATLLKLLKPV LDDVAQQKAP SDETICRQCE ELDVAINEAR ESLEEWSLKK 60
SKILWVLQSE PELLKIQSIA LKLSHTLCEL LESSPPSLGP SEIQPFIQEI QKFEVGQISK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGTTCTTAT TAACATTACT GTGGGAGAAT TCTTATTGAA CATGTAAGAA GCAGGGTATA 60
AGAGAGGTAG TTGTTCCATT CAATCATTAC AATCACATCT AACTGTATCT TTCCACCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002809	Amborella trichopoda	44.40	2.00e-145	509.00
IUUC-Aly-005439	Arabidopsis lyrata	48.05	3.00e-156	545.00
IUUC-Ath-007270	Arabidopsis thaliana	48.80	1.00e-161	562.00
IUUC-Bol-015931	Brassica oleracea	48.83	3.00e-166	577.00
IUUC-Bra-017191	Brassica rapa	48.83	1.00e-163	569.00
IUUC-Gma-043908	Glycine max	55.11	0.00e+00	711.00
IUUC-Mtr-058671	Medicago truncatula	52.99	0.00e+00	657.00
IUUC-Mac-064726	Musa acuminata	50.27	5.00e-177	613.00
IUUC-Pop-099351	Populus trichocarpa	58.41	0.00e+00	744.00
IUUC-Ppe-101535	Prunus persica	57.67	0.00e+00	694.00
IUUC-Smo-108918	Selaginella moellendorffii	42.81	2.00e-110	392.00
IUUC-Stu-112793	Solanum tuberosum	97.07	0.00e+00	1352.00
IUUC-Tca-121486	Theobroma cacao	57.14	0.00e+00	765.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence