iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099412

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_827710; POPTR_0019s13210g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s13210	POPTR_0019s13210.1	POPTR_0019s13210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.00e-06	27.4	44	107
E3 activity/RING/RING	1.70e-09	39.2	47	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk...........tcPvtrqplteedlvP 57
            f C I l+  +dPvv+ +G+ y   +I kwl s+             +cPv++++++++++vP
   Q: 44   GFDCNICLDSVQDPVVTLCGHLYCWPCIYKWLHSQSIsaenqdqqpqqQCPVCKAEVSQSTIVP 107
           599*****************************777777778889999**************999 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw......pglknssskefrCPlCr 46
           C iCl++ +d p+v+ CgH+++  C++kw         ++ ++++++CP+C+
   Q: 47   CNICLDSVQD-PVVTLCGHLYCWPCIYKWlhsqsiSAENQDQQPQQQCPVCK 97
           99********.9999**************999999777778999999****7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATEQYLEET VAQNDYNREY KPSLLKWKPI PKTAIDSDES PSNGFDCNIC LDSVQDPVVT 60
LCGHLYCWPC IYKWLHSQSI SAENQDQQPQ QQCPVCKAEV SQSTIVPLFG RGQTTKPSMR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATTATTTA TGTGATACTT CTCTCTATAT ATCTGTCTGT TTTGCTACCT CTCTTTCCCA 60
CTCTGTCATC ACCACCGTTA TCTCTCCATC TCTCAATCAC AGCCATTGCG CCATAACTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0019s13210g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence