iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015495

Ensembl Protein ID

Bo5g043830.1

UniProt Accession

A0A0D3CDD2; A0A0D3CDD2_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g043830	Bo5g043830.1	Bo5g043830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-29	102.2	198	232
UBD/Beta-Prp	3.20e-42	146.3	197	408

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvll 36
           H+d v++la +++++ s s+D+t+k+W+ ++ ++ 
   Q: 198  HADAVSALAVNNGFIYSVSWDKTLKIWRASDLRCK 232
           99********66****************8888876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvhtlkghedsvlsl 100
           +h + ++++++  ++ ++ + s+d+t+k+w++++  + +s++ h+++v+av  s ++ +  tgs Dr i+vw    d +  + v tl++h++ v +l
   Q: 197  EHADAVSALAV--NNGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAVAVSAND-TVYTGSADRRIRVWakpaDSKRHELVATLEKHKSAVNAL 290
           46667777888..9999***************************************6.9************************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvyslsfdsn 191
           +++ +g++l sGs dr i vw+ e  + + +    l+ghd+++ ++   +  +ll sGs+Drtvr+W+     + ++l+ l+g ht++v+sl+  ++
   Q: 291  ALNDDGSVLFSGSCDRSILVWEREDSSNYMSvsgALRGHDKAILSLFNVS--DLLLSGSADRTVRIWRRgidGSYSCLEVLSG-HTKPVKSLAAVKD 384
           *********************9999888888889*********9999988..9****************99999********9.*********7777 PP
   S: 192  g.....kelvsgsldgtvklwdlq 210
           +      ++vsgsldg vk w ++
   Q: 385  SetdgvVSIVSGSLDGEVKCWKVS 408
           767889***************998 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MRIISRLFES EDSSRRRRTQ KSPKHLDSTD SATSSPLSEA TGSSSLHSSL SLQTLPSVPS 60
LQKIPSETFA VTVSHPVTSS FKLRERSLPV TCLAVNGGYL FAVSGHEVSI YDRDMCAHLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGATTA TCTCACGGCT GTTTGAATCA GAAGATTCTT CCCGGAGAAG ACGAACACAA 60
AAATCTCCGA AGCATCTGGA CTCCACAGAT AGCGCCACGT CGTCGCCACT CAGCGAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	54.45	3.00e-101	361.00
IUUC-Ath-006951	Arabidopsis thaliana	82.98	0.00e+00	661.00
IUUC-Gma-043162	Glycine max	64.76	6.00e-126	444.00
IUUC-Mtr-057789	Medicago truncatula	62.27	3.00e-130	458.00
IUUC-Mac-065257	Musa acuminata	51.18	5.00e-94	337.00
IUUC-Olu-087837	Ostreococcus lucimarinus	30.48	9.00e-27	113.00
IUUC-Pno-094818	Phaeosphaeria nodorum	28.23	3.00e-14	72.40
IUUC-Smo-108947	Selaginella moellendorffii	43.65	1.00e-49	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence