iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022792

Ensembl Protein ID

EDP06001

UniProt Accession

A8IER1; A8IER1_CHLRE

Genbank Protein ID

EDP06001.1

Protein Name

Regulator of COP-II vesicle coat

Genbank Nucleotide ID

DS496116

Gene Name

SEC12; CHLREDRAFT_195501

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_195501	EDP06001	EDP06001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-06	25.5	147	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf.sd.tllvsGsdDgtikvWDlrt 32
           +laf +  +ll++GsdDgt+ v+++ +
   Q: 147  ALAFhPAgDLLAVGSDDGTVAVFEWPS 173
           578885559**************9866 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MGSGKAAPPK QPAGGPAAPI KTFKYGMPLY GLAWPEGETF YTCGGGGHGI KNRLVCAEAK 60
DGSLSDQTAE HLFGSVCPSR WVRCLALRTA RHAALAIAPG GRSIVFGVGD AGLRRLDLDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATCGG GCAAGGCAGC TCCGCCGAAG CAGCCGGCGG GCGGACCTGC CGCGCCGATC 60
AAGACGTTCA AGTATGGTAT GCCGCTGTAC GGCCTGGCGT GGCCGGAAGG GGAAACCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

cre:CHLREDRAFT_195501

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence