iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__1546__AT1G14260.1	fgenesh2_kg.1__1546__AT1G14260.1	fgenesh2_kg.1__1546__AT1G14260.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	82.59	2.00e-86	315.00	IUUC-Ath-006885
E3 activity/RING/RING	35.62	2.00e-08	57.40	IUUC-Hsa-046250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSNNHTVVYV NRLIRPVPLP PVLAEAENNM RSESLVDIYD GDTTECRICQ EECDIKTLES 60
PCSCNGSLKY AHRKCVQRWC NEKGNTICEI CHQPYQAGYT SPPPPPQSEE TTIDIGGGWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGAAGAAA GTTTCTCTCA TCTTCCCAAG AATTTTTTTT CTTGGGAGCA AAAACCACAA 60
ACTTCTTTTT GCGTCTCTTC TCACCTTCCT CCCGATTTTT CAGCTCAGAA CGAGAAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022143--DUF3675
IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12428--DUF3675
PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_471592

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002860	Amborella trichopoda	65.37	1.00e-59	222.00
IUUC-Ath-006885	Arabidopsis thaliana	83.33	4.00e-98	350.00
IUUC-Bta-012719	Bos taurus	32.97	6.00e-10	57.80
IUUC-Bdi-014827	Brachypodium distachyon	67.61	7.00e-56	209.00
IUUC-Bol-016602	Brassica oleracea	75.57	2.00e-98	350.00
IUUC-Bra-016861	Brassica rapa	75.38	2.00e-97	347.00
IUUC-Cja-019315	Callithrix jacchus	38.89	4.00e-09	53.50
IUUC-Cpo-021311	Cavia porcellus	35.62	9.00e-10	57.00
IUUC-Csa-023212	Chlorocebus sabaeus	35.71	1.00e-08	53.50
IUUC-Cho-024792	Choloepus hoffmanni	32.97	7.00e-10	57.00
IUUC-Dre-027921	Danio rerio	35.62	7.00e-10	57.40
IUUC-Dno-029652	Dasypus novemcinctus	32.97	6.00e-10	57.80
IUUC-Dor-030811	Dipodomys ordii	38.98	1.00e-09	56.60
IUUC-Eca-034077	Equus caballus	32.97	6.00e-10	57.00
IUUC-Fal-036875	Ficedula albicollis	36.51	1.00e-08	53.10
IUUC-Gac-042616	Gasterosteus aculeatus	35.62	1.00e-09	57.00
IUUC-Ggo-044663	Gorilla gorilla	32.97	1.00e-09	56.60
IUUC-Hsa-046250	Homo sapiens	32.97	6.00e-10	57.80
IUUC-Hvu-047133	Hordeum vulgare	54.47	1.00e-50	192.00
IUUC-Itr-048606	Ictidomys tridecemlineatus	32.97	6.00e-10	57.00
IUUC-Lch-049563	Latimeria chalumnae	41.82	2.00e-09	55.80
IUUC-Loc-052274	Lepisosteus oculatus	35.62	1.00e-09	56.20
IUUC-Laf-054358	Loxodonta africana	32.97	7.00e-10	57.40
IUUC-Mcc-055132	Macaca mulatta	32.97	7.00e-10	57.40
IUUC-Meu-056883	Macropus eugenii	34.25	3.00e-08	52.40
IUUC-Mmr-061668	Microcebus murinus	32.97	7.00e-10	57.40
IUUC-Mdo-062134	Monodelphis domestica	32.97	9.00e-10	57.00
IUUC-Mmu-063140	Mus musculus	32.97	8.00e-10	57.40
IUUC-Mac-064882	Musa acuminata	62.50	2.00e-54	205.00
IUUC-Mpu-065878	Mustela putorius furo	32.97	6.00e-10	57.00
IUUC-Mlu-067572	Myotis lucifugus	41.82	2.00e-09	55.80
IUUC-Nle-068993	Nomascus leucogenys	32.97	9.00e-10	57.00
IUUC-Opr-071182	Ochotona princeps	32.97	7.00e-10	57.00
IUUC-Ont-071812	Oreochromis niloticus	35.62	1.00e-09	56.60
IUUC-Oba-075948	Oryza barthii	63.22	2.00e-50	191.00
IUUC-Obr-076491	Oryza brachyantha	56.07	4.00e-52	197.00
IUUC-Ogl-077439	Oryza glaberrima	63.22	2.00e-50	191.00
IUUC-Ogu-078523	Oryza glumaepatula	60.78	1.00e-48	185.00
IUUC-Olo-080950	Oryza longistaminata	54.50	7.00e-39	153.00
IUUC-Ome-081221	Oryza meridionalis	63.22	2.00e-50	191.00
IUUC-Oni-082096	Oryza nivara	63.79	1.00e-50	192.00
IUUC-Opu-083949	Oryza punctata	63.22	2.00e-50	191.00
IUUC-Oru-085237	Oryza rufipogon	63.22	2.00e-50	191.00
IUUC-Osa-085964	Oryza sativa	63.79	1.00e-50	192.00
IUUC-Ola-087504	Oryzias latipes	35.62	1.00e-09	56.60
IUUC-Oga-088000	Otolemur garnettii	32.97	7.00e-10	57.40
IUUC-Oar-090175	Ovis aries	38.89	2.00e-09	55.50
IUUC-Ptr-090674	Pan troglodytes	32.97	7.00e-10	57.40
IUUC-Pan-092400	Papio anubis	32.97	7.00e-10	57.40
IUUC-Pfo-097278	Poecilia formosa	35.62	1.00e-09	56.60
IUUC-Pab-098715	Pongo abelii	27.19	9.00e-09	53.90
IUUC-Pop-099863	Populus trichocarpa	62.13	1.00e-53	202.00
IUUC-Pva-102806	Pteropus vampyrus	38.89	2.00e-09	55.50
IUUC-Sha-106546	Sarcophilus harrisii	35.62	1.00e-09	56.60
IUUC-Smo-109144	Selaginella moellendorffii	62.70	2.00e-49	187.00
IUUC-Sit-110567	Setaria italica	63.64	2.00e-54	204.00
IUUC-Sly-110996	Solanum lycopersicum	66.18	2.00e-59	221.00
IUUC-Stu-112782	Solanum tuberosum	65.20	8.00e-58	216.00
IUUC-Sbi-114552	Sorghum bicolor	54.39	1.00e-53	202.00
IUUC-Ssc-115689	Sus scrofa	38.89	2.00e-09	55.50
IUUC-Tru-118357	Takifugu rubripes	35.62	8.00e-10	57.00
IUUC-Tca-121215	Theobroma cacao	63.33	4.00e-66	243.00
IUUC-Tae-124189	Triticum aestivum	57.48	6.00e-65	239.00
IUUC-Tbe-128092	Tupaia belangeri	32.97	6.00e-10	57.40
IUUC-Ttr-128265	Tursiops truncatus	38.89	2.00e-09	55.50
IUUC-Vvi-131510	Vitis vinifera	58.19	3.00e-53	202.00
IUUC-Xtr-131868	Xenopus tropicalis	34.25	6.00e-09	54.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence