iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076628

Ensembl Protein ID

OB02G39020.1

UniProt Accession

J3LGY5; J3LGY5_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G39020	OB02G39020.1	OB02G39020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-28	98.8	233	270
UBD/Beta-Prp	7.20e-41	141.0	228	454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d vt+la  +d  ll s+s+D ++kvW+l +++++ 
   Q: 233  HVDAVTALAVsPDgALLYSASWDRSLKVWRLPDFRCVE 270
           99*********99999*******************986 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.....ktgkllrtltggh 179
            t+  h d v++l++sp+g  l s+s+dr ++vw l+   c+e++ + hd+++n ++v+pdg  + +Gs+D++++ W       k   l+ t++  h
   Q: 228  CTWVHHVDAVTALAVSPDGALLYSASWDRSLKVWRLPDFRCVESIAAAHDDAINALAVSPDG-RVYTGSADKKIKAWTRggpgqKKHALVGTMER-H 322
           45667888888888888888888888888888888888888888888888888888888844.56688888888888888888888888888887.8 PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlqtgec......vrtlnghtdnvksvrfspnderlvsgssDgsiriW.....dlrsgdllktlqlhn. 264
            ++v+ l++  ngk l sg++d++v +w+   g++        tl+gh + +++++++  +e++ sgs+D+++r+W     +    ++l +++ h  
   Q: 323  RSAVNALALGANGKVLYSGACDRSVVVWESADGDVggrmeaTGTLRGHAKAILCLAAT--GELVCSGSADRTVRVWrrgpeN--AYTCLAVMESHGa 415
           8888888888888888888888888888888555555555588888888888888888..8888888888888888554222..3344444444444 PP
   S: 265  ...........ssvisvavlsfgdnvl...........vlgsedskvniwk 293
                      + v                        ++g+ d++v+iw+
   Q: 416  avkslalvygrDDV------------SscssegasalvCSGTLDGDVKIWS 454
           44333333333222............2333333333225555588888886 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MKSSAGEQEE SQIQHEAAEG SMLSGAMSLA SQPSLRSLPS LGVHDLNTSP SFHRCIATLR 60
GNSSSSYVSA LAVDGDSLYI ASSDGRIRLW ALDSARRSRE DHQQDDTCSS TTVADTGSSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTCCT CTGCTGGTGA GCAAGAAGAA AGCCAAATCC AACATGAAGC TGCAGAAGGT 60
AGCATGCTCT CGGGAGCCAT GTCGCTCGCG TCGCAGCCAA GCCTCCGTTC CTTGCCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	38.85	2.00e-66	245.00
IUUC-Aly-006280	Arabidopsis lyrata	50.87	6.00e-77	280.00
IUUC-Ath-006722	Arabidopsis thaliana	45.95	8.00e-80	289.00
IUUC-Bdi-014607	Brachypodium distachyon	58.27	8.00e-119	419.00
IUUC-Bol-016325	Brassica oleracea	44.15	7.00e-75	273.00
IUUC-Bra-018099	Brassica rapa	45.23	3.00e-82	298.00
IUUC-Gma-043330	Glycine max	45.31	4.00e-97	347.00
IUUC-Hvu-047304	Hordeum vulgare	57.74	9.00e-118	415.00
IUUC-Lpe-050736	Leersia perrieri	73.89	0.00e+00	627.00
IUUC-Mtr-058389	Medicago truncatula	45.66	2.00e-82	298.00
IUUC-Mac-065157	Musa acuminata	53.20	7.00e-94	336.00
IUUC-Oba-075391	Oryza barthii	88.73	6.00e-85	306.00
IUUC-Ogl-076961	Oryza glaberrima	77.30	8.00e-163	565.00
IUUC-Ogu-078745	Oryza glumaepatula	76.59	3.00e-168	583.00
IUUC-Oin-079355	Oryza indica	77.05	1.00e-159	554.00
IUUC-Olo-080540	Oryza longistaminata	71.46	1.00e-142	498.00
IUUC-Ome-081476	Oryza meridionalis	76.59	7.00e-160	555.00
IUUC-Oni-082952	Oryza nivara	77.05	1.00e-159	555.00
IUUC-Opu-083726	Oryza punctata	78.05	4.00e-173	599.00
IUUC-Oru-084480	Oryza rufipogon	76.82	7.00e-159	552.00
IUUC-Osa-086252	Oryza sativa	77.08	1.00e-161	561.00
IUUC-Pop-099181	Populus trichocarpa	43.57	4.00e-86	310.00
IUUC-Ppe-101853	Prunus persica	46.38	4.00e-96	343.00
IUUC-Smo-108947	Selaginella moellendorffii	39.02	4.00e-40	157.00
IUUC-Sit-109950	Setaria italica	68.11	9.00e-129	452.00
IUUC-Sly-111917	Solanum lycopersicum	43.44	9.00e-91	326.00
IUUC-Stu-112480	Solanum tuberosum	42.86	1.00e-84	306.00
IUUC-Sbi-114568	Sorghum bicolor	65.21	1.00e-135	475.00
IUUC-Tca-121089	Theobroma cacao	44.27	6.00e-98	349.00
IUUC-Tae-122815	Triticum aestivum	56.10	7.00e-115	405.00
IUUC-Tur-126500	Triticum urartu	56.59	4.00e-116	410.00
IUUC-Vvi-131635	Vitis vinifera	44.91	1.00e-97	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence