iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017987

Ensembl Protein ID

Bra031875.1-P

UniProt Accession

M4ESU5; M4ESU5_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra031875	Bra031875.1	Bra031875.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.20e-19	68.3	30	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p ef+CpIs+++M+dPvv++sG+t++r +++ + + g     + +++ p + ++++Pn  ++++i+ wc++ ++
   Q: 30   PPVEFICPISKTIMSDPVVVSSGQTFERVCVQVCRDLGFIpkLNDLNENPPDFSTVIPNRNMKSTIDGWCDSVGV 104
           799***********************************98878889999999999***************98765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGKSGRLRWN PFSHRSSSSR QEQNQQQQQP PVEFICPISK TIMSDPVVVS SGQTFERVCV 60
QVCRDLGFIP KLNDLNENPP DFSTVIPNRN MKSTIDGWCD SVGVERPQPP DYSAVETNLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTAAGA GCGGACGGCT CAGATGGAAC CCTTTCAGCC ACAGATCCTC TTCATCAAGA 60
CAGGAACAGA ACCAACAACA ACAACAACCT CCAGTTGAAT TCATATGTCC GATTTCAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005887	Arabidopsis lyrata	81.72	0.00e+00	786.00
IUUC-Ath-007165	Arabidopsis thaliana	79.18	0.00e+00	781.00
IUUC-Bol-015998	Brassica oleracea	92.21	0.00e+00	821.00
IUUC-Gma-043462	Glycine max	60.28	1.00e-144	506.00
IUUC-Mtr-057660	Medicago truncatula	58.02	2.00e-123	436.00
IUUC-Ogl-077351	Oryza glaberrima	33.33	4.00e-38	152.00
IUUC-Ogu-077999	Oryza glumaepatula	34.66	6.00e-33	134.00
IUUC-Oin-079760	Oryza indica	33.64	2.00e-38	153.00
IUUC-Oni-082363	Oryza nivara	33.41	2.00e-38	153.00
IUUC-Osa-085631	Oryza sativa	33.64	2.00e-38	153.00
IUUC-Ppa-095595	Physcomitrella patens	40.06	2.00e-42	167.00
IUUC-Pop-099467	Populus trichocarpa	61.99	4.00e-139	487.00
IUUC-Ppe-101245	Prunus persica	54.22	7.00e-130	457.00
IUUC-Smo-109005	Selaginella moellendorffii	37.95	1.00e-36	147.00
IUUC-Sit-110079	Setaria italica	43.67	2.00e-38	153.00
IUUC-Sly-111894	Solanum lycopersicum	48.74	7.00e-99	353.00
IUUC-Stu-112202	Solanum tuberosum	48.66	5.00e-103	367.00
IUUC-Sbi-114055	Sorghum bicolor	42.42	7.00e-34	138.00
IUUC-Tca-121713	Theobroma cacao	58.59	1.00e-142	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence