iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018021

Ensembl Protein ID

Bra012630.1-P

UniProt Accession

M4D820; M4D820_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012630	Bra012630.1	Bra012630.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-07	31.1	430	472

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f++  +vl+    C Hvfh++C+  w         + +CP+Cr
   Q: 430  CAICLLEFDE-DHVLRllttCYHVFHQECIDLW------FESHKTCPVCR 472
           ********77.565555556*************......9999******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEDSKEPNQQ QQLQPPHGTL TGSYNRNAAA LTGPTSTSQA MHQWLSVGDL SQRQPQQPLR 60
LDGSMQFGNE QLGRGRLRKY ASDVIDLSLR LGCGGGASAN SSDPPPVKRT RRRPPGPVKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGATT CTAAAGAACC CAACCAACAG CAGCAGCTAC AACCACCGCA TGGGACGCTA 60
ACGGGCTCCT ACAACCGCAA CGCCGCCGCG TTAACCGGTC CCACCTCCAC TTCTCAGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR005175--PPC_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51742--PPC
PS50089--ZF_RING_2

Pfam

PF03479--DUF296
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005577	Arabidopsis lyrata	82.14	3.00e-119	421.00
IUUC-Ath-007042	Arabidopsis thaliana	78.16	3.00e-117	414.00
IUUC-Bol-015459	Brassica oleracea	96.30	6.00e-151	526.00
IUUC-Gma-042843	Glycine max	41.99	2.00e-50	191.00
IUUC-Mtr-058173	Medicago truncatula	45.22	3.00e-51	194.00
IUUC-Pop-099444	Populus trichocarpa	43.64	2.00e-49	188.00
IUUC-Ppe-101206	Prunus persica	48.01	2.00e-57	215.00
IUUC-Stu-112179	Solanum tuberosum	40.07	8.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence