iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099444

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_590023; POPTR_0001s02340g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s02340	POPTR_0001s02340.1	POPTR_0001s02340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-08	36.0	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f+d+  +++ + C Hvfh++C+  w         + +CP+Cr
   Q: 101  CAICLAEFSDEdlVRLlTVCYHVFHQECIDLW------LESHKTCPVCR 143
           ********77755443277*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSNSSSYPT TLSIGSPAIA LLVTVILLVL FFIGFFSICF YRFFMEGIVH GWHLRQSSLG 60
LVNPASSKEN PGLDSSQIQL FPTFTYSSVK DFRREQHGLE CAICLAEFSD EDLVRLLTVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCTA ATTCTTCATC ATACCCAACA ACTCTATCAA TTGGCTCACC GGCAATAGCC 60
CTACTTGTAA CCGTAATTCT TCTTGTGCTC TTCTTTATAG GTTTCTTCTC TATATGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s02340g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005577	Arabidopsis lyrata	44.63	4.00e-51	194.00
IUUC-Ath-007042	Arabidopsis thaliana	43.85	6.00e-50	190.00
IUUC-Bra-018021	Brassica rapa	43.64	5.00e-51	195.00
IUUC-Gma-044335	Glycine max	43.21	5.00e-42	164.00
IUUC-Mtr-058535	Medicago truncatula	42.23	3.00e-43	167.00
IUUC-Ppe-101206	Prunus persica	48.40	5.00e-56	210.00
IUUC-Sly-111357	Solanum lycopersicum	45.45	9.00e-51	192.00
IUUC-Stu-112179	Solanum tuberosum	41.04	3.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence