iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058593

Ensembl Protein ID

AES93973

UniProt Accession

G7KAM7; A0A0C3XAD8; G7KAM7_MEDTR

Genbank Protein ID

AES93973.2

Protein Name

Ubiquitin ligase cop1, putative

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g009530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g009530	KEH27416	KEH27416
MTR_5g009530	AES93973	AES93973
MTR_5g009530	KEH27417	KEH27417

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-24	86.6	812	843

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDl 30
           H+ + ++++f    + t ++sGsdD+t+k+W++
   Q: 812  HEKRAWSVDFspvcP-TKFASGSDDCTVKLWSI 843
           888899*****8544.9**************96 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDEELVDDRI QLEAVEDSQR QNKDDVLVKS QYDGKNVVEA ADTSQHQYET VEELTVKSYN 60
GFSFDIGTST TQVQHKHWQN LYQIGNNSGN VNSISDIGLI NSGPAATSSA WEDVGSTSFP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTTGTGTT GTAAGAGCGC GTGTTGTTGC TTCTCCAACC TTTTCTTTCC AAACCGACTT 60
TTGTTCATGT AAGTCCTTTC CTTTCAATTC TCACCATTTA TTTCTCTAAT TCCATATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016874--F:ligase activity

KEGG

mtr:MTR_5g009530

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	51.63	0.00e+00	783.00
IUUC-Atr-002506	Amborella trichopoda	47.53	0.00e+00	779.00
IUUC-Aly-005954	Arabidopsis lyrata	47.27	0.00e+00	845.00
IUUC-Ath-007104	Arabidopsis thaliana	47.47	0.00e+00	856.00
IUUC-Bdi-014698	Brachypodium distachyon	52.10	0.00e+00	782.00
IUUC-Bol-015237	Brassica oleracea	51.59	0.00e+00	852.00
IUUC-Bra-017767	Brassica rapa	50.28	0.00e+00	803.00
IUUC-Cho-024883	Choloepus hoffmanni	34.50	2.00e-43	169.00
IUUC-Gma-044005	Glycine max	70.85	0.00e+00	1533.00
IUUC-Hvu-047750	Hordeum vulgare	52.89	0.00e+00	786.00
IUUC-Lpe-051349	Leersia perrieri	53.91	0.00e+00	803.00
IUUC-Mac-064712	Musa acuminata	47.07	0.00e+00	776.00
IUUC-Oba-075097	Oryza barthii	44.15	0.00e+00	635.00
IUUC-Obr-076441	Oryza brachyantha	52.96	0.00e+00	802.00
IUUC-Ogl-077669	Oryza glaberrima	50.06	0.00e+00	786.00
IUUC-Ogu-078009	Oryza glumaepatula	44.35	0.00e+00	635.00
IUUC-Oin-079775	Oryza indica	50.06	0.00e+00	786.00
IUUC-Olo-080230	Oryza longistaminata	44.44	2.00e-176	612.00
IUUC-Ome-081669	Oryza meridionalis	43.80	0.00e+00	632.00
IUUC-Oni-082065	Oryza nivara	44.15	0.00e+00	633.00
IUUC-Opu-083153	Oryza punctata	45.26	0.00e+00	638.00
IUUC-Oru-084928	Oryza rufipogon	44.59	0.00e+00	631.00
IUUC-Osa-085875	Oryza sativa	50.53	0.00e+00	784.00
IUUC-Pop-098964	Populus trichocarpa	56.39	0.00e+00	1062.00
IUUC-Ppe-101771	Prunus persica	55.67	0.00e+00	1050.00
IUUC-Smo-109315	Selaginella moellendorffii	54.40	0.00e+00	652.00
IUUC-Sit-110269	Setaria italica	53.67	0.00e+00	795.00
IUUC-Sly-111360	Solanum lycopersicum	57.27	0.00e+00	831.00
IUUC-Stu-112382	Solanum tuberosum	46.88	0.00e+00	777.00
IUUC-Sbi-114133	Sorghum bicolor	52.55	0.00e+00	779.00
IUUC-Tca-121721	Theobroma cacao	55.11	0.00e+00	1023.00
IUUC-Tae-123049	Triticum aestivum	53.80	0.00e+00	797.00
IUUC-Tur-126357	Triticum urartu	51.43	0.00e+00	741.00
IUUC-Vvi-131450	Vitis vinifera	50.10	0.00e+00	854.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence