iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002838

Ensembl Protein ID

ERN05905

UniProt Accession

W1PFR1; W1PFR1_AMBTC

Genbank Protein ID

ERN05905.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393980

Gene Name

AMTR_s00006p00267510

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00006p00267510	ERN05905	ERN05905

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.70e-14	52.8	1306	1352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC+vCg   +d+ s++ C+ C++ +H  Cl+++   + p+ + w+Cp+C 
   Q: 1306 VCKVCGIDRDDD-SVLLCDSCDSEYHTYCLNPP-LAKIPDGN-WYCPSCV 1352
           8******99987.7*******************.*******6.******6 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDEGSEKKEM GPRSGISLLF IDLNEIPTSS GSNSGLEPTS PETYELVCQI HKPRIEPVRG 60
PAESPGETGV GLCPICGRLE SRGGTVICDA CESGFHLGCV KLRVRSASLL EDWICPNCLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAGG GCTCAGAGAA GAAGGAAATG GGCCCTAGAA GTGGCATATC TCTTCTCTTT 60
ATTGACCTCA ATGAGATCCC AACCAGTAGT GGTAGTAACA GTGGGCTTGA GCCCACTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018501--DDT_dom
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS51543--FYRC
PS51542--FYRN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF15612--WHIM1

SMART

SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0004402--F:histone acetyltransferase activity
GO:0008270--F:zinc ion binding
GO:0043966--P:histone H3 acetylation
GO:0043967--P:histone H4 acetylation
GO:0048573--P:photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated
GO:0010223--P:secondary shoot formation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000077	Aegilops tauschii	45.50	0.00e+00	676.00
IUUC-Aly-006097	Arabidopsis lyrata	38.20	0.00e+00	1200.00
IUUC-Ath-007218	Arabidopsis thaliana	38.98	0.00e+00	1193.00
IUUC-Bdi-014742	Brachypodium distachyon	37.18	8.00e-107	380.00
IUUC-Bol-015336	Brassica oleracea	42.14	0.00e+00	949.00
IUUC-Bra-017998	Brassica rapa	37.47	0.00e+00	1174.00
IUUC-Gma-042823	Glycine max	40.80	0.00e+00	1270.00
IUUC-Hvu-047583	Hordeum vulgare	33.21	8.00e-139	486.00
IUUC-Lpe-050785	Leersia perrieri	39.47	0.00e+00	1196.00
IUUC-Mtr-058285	Medicago truncatula	38.92	0.00e+00	1356.00
IUUC-Mvi-060436	Microbotryum violaceum	42.22	5.00e-09	55.10
IUUC-Mac-065069	Musa acuminata	47.18	0.00e+00	979.00
IUUC-Oba-075854	Oryza barthii	40.82	0.00e+00	1314.00
IUUC-Obr-076343	Oryza brachyantha	40.02	0.00e+00	1281.00
IUUC-Ogl-077886	Oryza glaberrima	39.16	0.00e+00	675.00
IUUC-Ogu-078887	Oryza glumaepatula	40.03	0.00e+00	1313.00
IUUC-Olo-080668	Oryza longistaminata	40.69	0.00e+00	1307.00
IUUC-Ome-081800	Oryza meridionalis	40.67	0.00e+00	1308.00
IUUC-Oni-082593	Oryza nivara	40.74	0.00e+00	1311.00
IUUC-Opu-083363	Oryza punctata	39.79	0.00e+00	1302.00
IUUC-Oru-084298	Oryza rufipogon	40.92	0.00e+00	1306.00
IUUC-Osa-085487	Oryza sativa	38.02	4.00e-179	620.00
IUUC-Ppa-095846	Physcomitrella patens	36.60	1.00e-102	368.00
IUUC-Ppe-101198	Prunus persica	44.70	0.00e+00	1475.00
IUUC-Sit-110633	Setaria italica	39.87	0.00e+00	1212.00
IUUC-Tca-121595	Theobroma cacao	46.56	0.00e+00	1145.00
IUUC-Tae-123821	Triticum aestivum	37.40	0.00e+00	1167.00
IUUC-Tur-126242	Triticum urartu	45.21	0.00e+00	681.00
IUUC-Vvi-130929	Vitis vinifera	47.53	0.00e+00	1218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence