iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112602

Ensembl Protein ID

PGSC0003DMT400072314

UniProt Accession

M1CQ24; M1CQ24_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028140	PGSC0003DMT400072314	PGSC0003DMT400072314

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	33.2	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+  kd +++lp C H+fh++C+  w       + + +CP+Cr
   Q: 119  CSICLADYknKDVLRLLPdCEHLFHLKCVDPW------LMLNPSCPVCR 161
           ********6666699999**************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNNTTTTLSD PSSNTDGFLG SGHIGGFGYG IGVSVGILLL ITTITLTSYF CTRNQTTELP 60
PRRRHRIIRS TLQHDHGQDD NNNCIVDIIG IDEKTLLSYP KLLYSEAKVN HKDTTASCCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATATAATTA TCTTAATTTG GACCATTTGC TTAATTTTGG TCTTATAATA CCAAATGCCC 60
AACCAAACCA AAAAACCACT CCCATAGCCA TAATTCTCTT AAAAAAACAT CATGAATAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102588618

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006506	Arabidopsis lyrata	53.98	7.00e-42	162.00
IUUC-Bol-015155	Brassica oleracea	49.20	2.00e-41	160.00
IUUC-Bra-017974	Brassica rapa	49.73	7.00e-43	165.00
IUUC-Mtr-058770	Medicago truncatula	60.82	1.00e-32	130.00
IUUC-Mac-065006	Musa acuminata	72.53	3.00e-31	126.00
IUUC-Obr-076328	Oryza brachyantha	51.39	3.00e-18	83.60
IUUC-Pop-099253	Populus trichocarpa	62.96	1.00e-36	144.00
IUUC-Ppe-101919	Prunus persica	62.04	4.00e-35	139.00
IUUC-Sly-111057	Solanum lycopersicum	92.59	3.00e-57	213.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence