iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114297

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G371300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g035310	Sb01g035310.1	Sb01g035310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	31.4	187	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e f   ++  + +pC+H++h dC+  w        ++ +CP+Cr
   Q: 187  CPVCKEKFelgSE-AREMPCKHLYHSDCIVPW------LEQHNSCPVCR 228
           ********77544.899***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSVGRQSYWC YQCRQRVRPR GREMVCPYCD SGFVAEMDDV DALMSHFVGM DPDFHRDPRF 60
GIMEAISAVM RHGMSGMNRE VDVRGRPNIF SDLEMEFGSG PWLLFRGQLP GHLTEDNGFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTGTCTTC TTCCTTTTCA TCATTCCGCT CCCCGGCCTC CGCTCCTCCC CCTCAGGCTC 60
TCACCCCCGT CTGGTGGTGG TTGCCGCGGC GCCGCTCCTC GCTCGTGGTG GCGGTGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g035310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000551	Aegilops tauschii	84.88	2.00e-112	397.00
IUUC-Aml-002001	Ailuropoda melanoleuca	48.65	6.00e-27	114.00
IUUC-Atr-002522	Amborella trichopoda	63.10	2.00e-54	204.00
IUUC-Apl-003778	Anas platyrhynchos	49.55	8.00e-29	119.00
IUUC-Aly-006495	Arabidopsis lyrata	50.21	1.00e-57	216.00
IUUC-Ath-006961	Arabidopsis thaliana	49.80	1.00e-58	219.00
IUUC-Ame-010626	Astyanax mexicanus	50.45	1.00e-28	119.00
IUUC-Bta-013190	Bos taurus	45.90	5.00e-26	110.00
IUUC-Bdi-014137	Brachypodium distachyon	88.93	3.00e-139	486.00
IUUC-Bol-016039	Brassica oleracea	53.81	3.00e-62	231.00
IUUC-Bra-017780	Brassica rapa	46.55	1.00e-50	192.00
IUUC-Cja-019575	Callithrix jacchus	49.55	9.00e-28	116.00
IUUC-Cfa-020142	Canis familiaris	48.65	4.00e-27	114.00
IUUC-Cpo-022451	Cavia porcellus	49.55	1.00e-27	115.00
IUUC-Csa-023433	Chlorocebus sabaeus	49.55	1.00e-27	115.00
IUUC-Cho-024643	Choloepus hoffmanni	47.27	1.00e-25	109.00
IUUC-Dre-027400	Danio rerio	50.45	1.00e-28	119.00
IUUC-Dno-029349	Dasypus novemcinctus	49.55	8.00e-28	116.00
IUUC-Dor-030103	Dipodomys ordii	49.55	8.00e-28	116.00
IUUC-Ete-032392	Echinops telfairi	45.45	2.00e-24	105.00
IUUC-Eca-034240	Equus caballus	48.65	6.00e-27	113.00
IUUC-Fca-036192	Felis catus	47.27	9.00e-26	109.00
IUUC-Fal-037027	Ficedula albicollis	49.55	1.00e-28	119.00
IUUC-Gmo-038515	Gadus morhua	48.65	2.00e-28	118.00
IUUC-Gga-040682	Gallus gallus	50.45	1.00e-28	119.00
IUUC-Gac-041369	Gasterosteus aculeatus	48.65	4.00e-28	117.00
IUUC-Gma-043643	Glycine max	52.98	4.00e-77	280.00
IUUC-Ggo-044873	Gorilla gorilla	47.27	6.00e-26	110.00
IUUC-Hsa-046723	Homo sapiens	49.55	2.00e-27	115.00
IUUC-Hvu-047602	Hordeum vulgare	84.34	2.00e-123	434.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	49.55	5.00e-28	117.00
IUUC-Lch-050673	Latimeria chalumnae	33.09	5.00e-32	130.00
IUUC-Lpe-051427	Leersia perrieri	90.27	3.00e-125	439.00
IUUC-Loc-052470	Lepisosteus oculatus	49.47	8.00e-27	113.00
IUUC-Laf-054384	Loxodonta africana	45.45	2.00e-24	105.00
IUUC-Mcc-055739	Macaca mulatta	49.55	2.00e-27	115.00
IUUC-Meu-056635	Macropus eugenii	47.27	2.00e-26	111.00
IUUC-Mtr-057697	Medicago truncatula	45.15	1.00e-57	215.00
IUUC-Mga-059349	Meleagris gallopavo	50.45	1.00e-28	119.00
IUUC-Mmr-060653	Microcebus murinus	49.55	1.00e-27	115.00
IUUC-Mdo-062442	Monodelphis domestica	47.75	1.00e-27	116.00
IUUC-Mmu-064148	Mus musculus	50.45	3.00e-28	118.00
IUUC-Mac-065613	Musa acuminata	58.12	3.00e-75	273.00
IUUC-Mpu-065917	Mustela putorius furo	48.65	4.00e-27	114.00
IUUC-Mlu-067495	Myotis lucifugus	50.45	1.00e-28	119.00
IUUC-Nle-069274	Nomascus leucogenys	49.55	2.00e-27	115.00
IUUC-Opr-070812	Ochotona princeps	47.27	2.00e-25	108.00
IUUC-Ont-071505	Oreochromis niloticus	48.65	2.00e-28	119.00
IUUC-Oan-073225	Ornithorhynchus anatinus	49.55	7.00e-28	116.00
IUUC-Ocu-074691	Oryctolagus cuniculus	48.08	4.00e-25	107.00
IUUC-Oba-075047	Oryza barthii	91.07	3.00e-138	483.00
IUUC-Obr-076829	Oryza brachyantha	90.18	3.00e-138	483.00
IUUC-Ogl-077378	Oryza glaberrima	90.71	1.00e-137	481.00
IUUC-Ogu-078709	Oryza glumaepatula	90.71	1.00e-137	481.00
IUUC-Oin-079400	Oryza indica	37.24	1.00e-37	149.00
IUUC-Olo-080762	Oryza longistaminata	91.07	3.00e-138	483.00
IUUC-Ome-081717	Oryza meridionalis	45.53	3.00e-58	218.00
IUUC-Oni-083090	Oryza nivara	90.71	1.00e-137	481.00
IUUC-Opu-083898	Oryza punctata	90.00	6.00e-136	475.00
IUUC-Oru-084267	Oryza rufipogon	91.07	6.00e-139	485.00
IUUC-Osa-086229	Oryza sativa	90.71	1.00e-137	481.00
IUUC-Ola-087338	Oryzias latipes	50.45	9.00e-29	119.00
IUUC-Oga-088067	Otolemur garnettii	49.55	8.00e-28	116.00
IUUC-Oar-089999	Ovis aries	45.90	8.00e-26	110.00
IUUC-Ptr-091473	Pan troglodytes	47.27	6.00e-26	110.00
IUUC-Pan-092424	Papio anubis	49.55	2.00e-27	115.00
IUUC-Psi-093171	Pelodiscus sinensis	48.65	1.00e-27	116.00
IUUC-Pma-094530	Petromyzon marinus	49.53	4.00e-26	110.00
IUUC-Pfo-097402	Poecilia formosa	49.55	2.00e-28	118.00
IUUC-Pab-098466	Pongo abelii	47.27	6.00e-26	110.00
IUUC-Pop-099462	Populus trichocarpa	56.49	1.00e-71	262.00
IUUC-Pca-100442	Procavia capensis	48.65	1.00e-27	115.00
IUUC-Ppe-101324	Prunus persica	51.93	3.00e-68	251.00
IUUC-Pva-103240	Pteropus vampyrus	49.55	2.00e-27	115.00
IUUC-Rno-105203	Rattus norvegicus	50.45	4.00e-28	117.00
IUUC-Sha-107638	Sarcophilus harrisii	47.75	5.00e-28	117.00
IUUC-Sit-110648	Setaria italica	97.19	7.00e-147	511.00
IUUC-Sly-111407	Solanum lycopersicum	54.14	3.00e-78	284.00
IUUC-Stu-112467	Solanum tuberosum	54.33	3.00e-78	284.00
IUUC-Ssc-115917	Sus scrofa	34.48	5.00e-29	120.00
IUUC-Tgu-117502	Taeniopygia guttata	49.55	4.00e-28	117.00
IUUC-Tru-117681	Takifugu rubripes	47.75	2.00e-27	115.00
IUUC-Tsy-119630	Tarsius syrichta	44.83	4.00e-24	104.00
IUUC-Tni-120092	Tetraodon nigroviridis	46.85	2.00e-27	115.00
IUUC-Tca-121480	Theobroma cacao	53.38	1.00e-80	291.00
IUUC-Tae-124679	Triticum aestivum	85.05	4.00e-126	442.00
IUUC-Tur-125986	Triticum urartu	45.45	6.00e-59	221.00
IUUC-Ttr-129117	Tursiops truncatus	32.64	1.00e-25	108.00
IUUC-Vpa-130755	Vicugna pacos	47.27	1.00e-25	109.00
IUUC-Vvi-131335	Vitis vinifera	54.70	6.00e-83	299.00
IUUC-Xtr-132815	Xenopus tropicalis	30.94	4.00e-33	134.00
IUUC-Xma-133481	Xiphophorus maculatus	49.55	2.00e-28	118.00
IUUC-Zma-135326	Zea mays	92.28	1.00e-134	471.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence