iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015751

Ensembl Protein ID

Bo4g134590.1

UniProt Accession

A0A0D3BZ60; A0A0D3BZ60_BRAOL

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g134590	Bo4g134590.1	Bo4g134590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.60e-09	37.1	205	254

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++ + ++  ++ C++  C+  ewfH++C++l+  e++ +  kw+Cp Cr
   Q: 205  TYC-VCHQVSFGD--MIACDNenCQggEWFHYTCVGLT-PETRFKG-KWYCPTCR 254
           69*.********9..*****999*999***********.4444444.4******8 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYASTF PAELQRLLNT VRELDERSQS LINQTRQQTK YCLGLASKKG 60
SGNNNHYNTG LDDDETIDKM RKEIESSQEN ALSLCTEKVL LARQAYDLID SHLKRLDEDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATAG CGCGAACTGG AGTTTACGTG GATGATTACC TCGAGTGTAA GATCGATCCA 60
CCCTCTCCTA TTTTTTCTGA TTCGTTGTTT CGATTTAGGG CTTCAATTTT ATTTCATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	71.60	9.00e-100	355.00
IUUC-Ath-006578	Arabidopsis thaliana	91.22	2.00e-123	434.00
IUUC-Ame-011133	Astyanax mexicanus	33.58	2.00e-34	138.00
IUUC-Bdi-014508	Brachypodium distachyon	65.76	4.00e-95	340.00
IUUC-Bra-017962	Brassica rapa	94.68	1.00e-139	488.00
IUUC-Cel-018700	Caenorhabditis elegans	44.00	6.00e-05	43.10
IUUC-Gmo-038982	Gadus morhua	35.41	4.00e-37	147.00
IUUC-Gac-042184	Gasterosteus aculeatus	35.04	5.00e-36	144.00
IUUC-Gma-044224	Glycine max	77.36	4.00e-112	397.00
IUUC-Hvu-047275	Hordeum vulgare	62.60	5.00e-91	327.00
IUUC-Lpe-051512	Leersia perrieri	64.09	6.00e-94	337.00
IUUC-Mtr-058288	Medicago truncatula	78.33	8.00e-114	402.00
IUUC-Mac-065671	Musa acuminata	70.82	8.00e-103	365.00
IUUC-Ont-072446	Oreochromis niloticus	33.98	1.00e-35	142.00
IUUC-Obr-076822	Oryza brachyantha	65.64	2.00e-97	347.00
IUUC-Ogl-077432	Oryza glaberrima	64.48	5.00e-96	343.00
IUUC-Osa-085802	Oryza sativa	64.48	5.00e-96	343.00
IUUC-Ola-086429	Oryzias latipes	33.96	6.00e-32	130.00
IUUC-Ppa-096009	Physcomitrella patens	61.80	1.00e-83	302.00
IUUC-Pfo-096617	Poecilia formosa	35.55	6.00e-37	147.00
IUUC-Pop-099544	Populus trichocarpa	77.24	3.00e-105	374.00
IUUC-Ppe-101698	Prunus persica	79.32	1.00e-97	348.00
IUUC-Smo-108678	Selaginella moellendorffii	59.30	7.00e-80	290.00
IUUC-Sit-110189	Setaria italica	66.28	3.00e-90	324.00
IUUC-Sly-111209	Solanum lycopersicum	77.10	5.00e-103	366.00
IUUC-Stu-112762	Solanum tuberosum	77.10	4.00e-103	367.00
IUUC-Sbi-114379	Sorghum bicolor	65.12	5.00e-98	350.00
IUUC-Tca-121271	Theobroma cacao	82.44	8.00e-115	405.00
IUUC-Tae-122798	Triticum aestivum	62.60	2.00e-91	328.00
IUUC-Vvi-131583	Vitis vinifera	78.24	4.00e-115	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence