iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130939

UUCD1 version

UUC-ViV-00171

Ensembl Protein ID

VIT_00s0776g00020.t01

UniProt Accession

F6I2F4; F6I2F4_VITVI

Genbank Protein ID

CCB61121.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596568

Gene Name

VIT_00s0776g00020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0776g00020	VIT_00s0776g00020.t01	VIT_00s0776g00020.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-37	124.7	140	178
UBD/Beta-Prp	7.60e-64	216.3	72	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +++ ++f +d + +vsG+ D+++kvWDl+ g+ll+
   Q: 140  GHTRGISTIRFtPDgRWVVSGGFDNVVKVWDLTAGKLLH 178
           8***********99999******************9986 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvs 111
           l+a+g  +g ik+wd+++ k++r+l gh +  tav+f+p g+++++gs D ++kvwd+++  c+ht+kgh++ + +++f p+g ++vs
   Q: 72   LVAAGASTGVIKLWDLEEAKMVRTLTGHRSNCTAVEFHPFGEFFASGSLDTNLKVWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVS 159
           5899999********************************************************************************* PP
   S: 112  GshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           G+ d++++vwdl  g+ l+  ++ h+g ++++ +hp ++ll++Gs+Drtv++Wdl+t +l+   +      v+s++f+++g + + ++
   Q: 160  GGFDNVVKVWDLTAGKLLH-DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSARP-EATGVRSITFHPDG-RTLFCG 244
           *******************.9999****************************************98.999**********9.556799 PP
   S: 200  ldgtvklwdlq 210
           ld ++k+++ +
   Q: 245  LDDSLKVYSWE 255
           9999**99865 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAKRGYKLQE FVAHTTNVNC LNIGKKACRL LISGGDDHKV NLWAIGKPTS LMSLCGHTSP 60
VESVTFDSAE VLVAAGASTG VIKLWDLEEA KMVRTLTGHR SNCTAVEFHP FGEFFASGSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGGAGGGG CAGATTGGTC AAAGCGCGTG AACACCTTAA ACCTCCAGGA TGGCCTGATT 60
GCAATTCCAG TCTTCACTTT TGTCTCCGGG GTTCAATCTC TGTTATACCT TTTCCGATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005897	Arabidopsis lyrata	61.42	0.00e+00	635.00
IUUC-Ath-006624	Arabidopsis thaliana	63.88	0.00e+00	655.00
IUUC-Bol-015355	Brassica oleracea	62.14	0.00e+00	652.00
IUUC-Bra-017265	Brassica rapa	62.33	0.00e+00	654.00
IUUC-Gma-043323	Glycine max	69.87	0.00e+00	752.00
IUUC-Mtr-057706	Medicago truncatula	66.03	0.00e+00	708.00
IUUC-Mac-065245	Musa acuminata	69.02	3.00e-156	545.00
IUUC-Pop-100006	Populus trichocarpa	72.17	0.00e+00	802.00
IUUC-Ppe-101697	Prunus persica	70.25	0.00e+00	753.00
IUUC-Sly-111901	Solanum lycopersicum	64.68	0.00e+00	688.00
IUUC-Sbi-114389	Sorghum bicolor	74.52	2.00e-144	505.00
IUUC-Tca-121590	Theobroma cacao	74.33	0.00e+00	821.00
IUUC-Tur-126181	Triticum urartu	66.67	5.00e-146	511.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence