iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114645

UUCD1 version

UUC-SoB-01738

Ensembl Protein ID

Sb06g016730.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g016730	Sb06g016730.1	Sb06g016730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.30e-19	69.1	67	237

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           Gl+NlgN C++N +LQ+L+++  + ++l +   +   l+  ++k    +ll +l +l+e l    +++++ +p+ +++al+ + ++f+ ++qqDa+
   Q: 67   GLRNLGNNCFLNVILQALASCGGFISFLDNllATDGLLP--EEKAVRMPLLLALSSLLEDLSivRDERTVLNPHGVMHALSFYVSHFNLTRQQDAS 160
           9***************************99642333333..33577889************8889******************************* PP
   S: 94   Eflaflldqleeelkk....eknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssre 166
           E + +ll +l++e+++    ++++  + + + +k  +++e +  + k+ k+ +   F+g++ s + c +c +v  ++
   Q: 161  EAFLHLLISLRDEFSHcyvpHRSSLADITLSHSKVYKQREGNLPECKRWKQNLFGPFDGTIGSILSCRNCSSVVDSY 237
           **************776665344444444445555666667777888888999999***************998544 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGKFMHDNRL LSPSEVNRRQ YSLAAVAVGL GLGVAGLCKA LHSGLSIPWV SPRNLFLGSG 60
RVYYVGGLRN LGNNCFLNVI LQALASCGGF ISFLDNLLAT DGLLPEEKAV RMPLLLALSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTACTTCTA CTCACCCGCG TGCCCGCGCG CGCTCTCTCG TGCGGCAACT GGACGACCGC 60
CGCCGCCGCC GCCCTACGCC AGGTGCTGAG GTCTTCGTCA GTACTTTTAG CAGGTCTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047422	Hordeum vulgare	84.96	6.00e-56	207.00
IUUC-Mtr-057976	Medicago truncatula	43.46	4.00e-36	145.00
IUUC-Mac-065296	Musa acuminata	49.03	1.00e-57	215.00
IUUC-Ppa-096015	Physcomitrella patens	31.05	5.00e-14	72.40
IUUC-Pop-099432	Populus trichocarpa	47.62	7.00e-36	143.00
IUUC-Smo-109191	Selaginella moellendorffii	38.12	3.00e-15	75.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence