iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114116

UUCD1 version

UUC-SoB-01118

Ensembl Protein ID

Sb08g022940.1

UniProt Accession

C5YT07; C5YT07_SORBI

Genbank Protein ID

EES16449.1; KXG24129.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767; CM000767

Gene Name

SORBI_008G188700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g022940	Sb08g022940.1	Sb08g022940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.60e-06	26.5	21	76
E3 activity/RING/RING	1.60e-06	29.3	24	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
            f C I +el+++P v+ +G+ +   ++ kwl+   +  +cPv+++ ++e++lvP 
   Q: 21   SFECNICFELPQEPIVTLCGHLFCWPCLYKWLRIHSHspECPVCKAIVEEDKLVPL 76
           599*****************************55444469**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e +++ p+v+ CgH+f+  Cl+kw    +  s +  CP+C+
   Q: 24   CNICFELPQE-PIVTLCGHLFCWPCLYKW---LRIHSHSPECPVCK 65
           99******99.999***************...555888999****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAANVGESTS GSSSGADAGG SFECNICFEL PQEPIVTLCG HLFCWPCLYK WLRIHSHSPE 60
CPVCKAIVEE DKLVPLYGRG KDRVDPRSKN VPGAADIPNR PAGQRPATAP QVDPNTHFPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTTTTCTC CCGTCCCCAT CTGCCTGCCT CGGCTTGTCG CACGCTTCGA AGCTTCTCGC 60
ATCTACTACT TGGTGCTCCG TCTCCGTCTC CGTCTCCGTC TCCCACGCCA CCGCCGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_08g022940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	70.91	5.00e-76	276.00
IUUC-Atr-002444	Amborella trichopoda	56.04	3.00e-52	197.00
IUUC-Aly-006065	Arabidopsis lyrata	54.55	8.00e-51	192.00
IUUC-Ath-007267	Arabidopsis thaliana	60.87	1.00e-49	188.00
IUUC-Bdi-014183	Brachypodium distachyon	80.34	2.00e-79	287.00
IUUC-Bol-016132	Brassica oleracea	53.49	1.00e-52	198.00
IUUC-Bra-017631	Brassica rapa	53.00	4.00e-52	196.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	54.84	2.00e-25	105.00
IUUC-Eeu-034614	Erinaceus europaeus	41.67	1.00e-13	68.60
IUUC-Gma-043248	Glycine max	54.72	4.00e-60	223.00
IUUC-Hvu-047043	Hordeum vulgare	82.55	2.00e-78	284.00
IUUC-Lpe-050836	Leersia perrieri	86.21	4.00e-82	298.00
IUUC-Mtr-058107	Medicago truncatula	52.07	5.00e-52	196.00
IUUC-Mac-065053	Musa acuminata	68.06	9.00e-64	236.00
IUUC-Obr-076736	Oryza brachyantha	80.73	7.00e-93	332.00
IUUC-Ogl-076945	Oryza glaberrima	85.92	2.00e-93	333.00
IUUC-Oin-079606	Oryza indica	84.98	2.00e-92	331.00
IUUC-Olo-080378	Oryza longistaminata	85.92	2.00e-93	333.00
IUUC-Ome-081459	Oryza meridionalis	85.92	3.00e-93	333.00
IUUC-Oni-082738	Oryza nivara	85.92	4.00e-94	337.00
IUUC-Opu-083407	Oryza punctata	82.55	2.00e-93	334.00
IUUC-Osa-086126	Oryza sativa	85.92	2.00e-93	333.00
IUUC-Ppa-095474	Physcomitrella patens	60.13	1.00e-44	172.00
IUUC-Pop-098889	Populus trichocarpa	59.43	2.00e-59	221.00
IUUC-Ppe-102011	Prunus persica	56.48	2.00e-61	227.00
IUUC-Smo-109663	Selaginella moellendorffii	59.18	1.00e-31	127.00
IUUC-Sit-109934	Setaria italica	93.53	5.00e-88	316.00
IUUC-Sly-111255	Solanum lycopersicum	61.96	6.00e-48	182.00
IUUC-Stu-112117	Solanum tuberosum	63.06	3.00e-47	180.00
IUUC-Tca-121264	Theobroma cacao	66.46	9.00e-56	209.00
IUUC-Tae-124257	Triticum aestivum	83.18	4.00e-79	286.00
IUUC-Tur-126443	Triticum urartu	87.26	1.00e-80	291.00
IUUC-Vvi-131449	Vitis vinifera	60.56	1.00e-64	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence