iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135271

UUCD1 version

UUC-ZeM-01458

Ensembl Protein ID

Zm00001d050063_T001

UniProt Accession

B4FSN6; B4FSN6_MAIZE

Genbank Protein ID

ACF85129.1; AQK51861.1

Protein Name

RING-H2 finger protein ATL13

Genbank Nucleotide ID

BT040124; CM000780

Gene Name

ZEAMMB73_Zm00001d050063

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d050063	Zm00001d050063_T001	Zm00001d050063_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	30.9	153	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh dC+  w         + +CPlCr
   Q: 153  CAVCLCEFadDDRLRLLPkCSHAFHVDCIDTW------LLSHSTCPLCR 195
           ********88444999****************......89999*****8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSHYTMHAAI NYAALPPTSP LQLPLPYLPP PPPPPLPLPL PPLLSPPPPA AASSDAGFQN 60
RISPSVLLII LILAVIFFVS GLLHLLVRFL LRPAPRDPGD AYGGDANATA FQGQLQQLFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCACT ACACCATGCA TGCAGCCATC AACTACGCCG CGCTGCCACC CACGTCGCCG 60
CTGCAGCTCC CCCTCCCGTA CCTCCCTCCG CCTCCTCCTC CGCCGTTACC GCTACCGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

zma:100273075

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	42.44	5.00e-67	248.00
IUUC-Aly-006179	Arabidopsis lyrata	40.28	1.00e-55	210.00
IUUC-Ath-006858	Arabidopsis thaliana	41.81	6.00e-58	218.00
IUUC-Ame-011097	Astyanax mexicanus	37.93	5.00e-15	75.90
IUUC-Bdi-014934	Brachypodium distachyon	66.38	3.00e-122	431.00
IUUC-Bol-015406	Brassica oleracea	41.79	2.00e-58	218.00
IUUC-Bra-016948	Brassica rapa	42.51	5.00e-60	224.00
IUUC-Dre-028428	Danio rerio	36.21	3.00e-15	76.60
IUUC-Gma-043592	Glycine max	45.91	2.00e-73	269.00
IUUC-Hvu-047392	Hordeum vulgare	66.39	6.00e-128	450.00
IUUC-Lpe-051680	Leersia perrieri	73.42	1.00e-130	459.00
IUUC-Laf-054328	Loxodonta africana	40.86	6.00e-15	75.10
IUUC-Mtr-058782	Medicago truncatula	44.06	2.00e-71	262.00
IUUC-Mac-064639	Musa acuminata	52.64	5.00e-97	347.00
IUUC-Oan-073036	Ornithorhynchus anatinus	40.86	2.00e-14	73.90
IUUC-Oba-075403	Oryza barthii	72.94	2.00e-144	505.00
IUUC-Obr-076503	Oryza brachyantha	74.41	7.00e-138	483.00
IUUC-Ogl-077574	Oryza glaberrima	73.28	1.00e-144	505.00
IUUC-Ogu-077986	Oryza glumaepatula	73.28	1.00e-144	505.00
IUUC-Oin-079091	Oryza indica	73.28	3.00e-146	511.00
IUUC-Olo-080722	Oryza longistaminata	84.95	6.00e-49	186.00
IUUC-Ome-081627	Oryza meridionalis	75.35	8.00e-139	486.00
IUUC-Oni-082260	Oryza nivara	73.28	1.00e-144	506.00
IUUC-Opu-083578	Oryza punctata	71.63	1.00e-144	505.00
IUUC-Oru-084794	Oryza rufipogon	73.28	1.00e-144	505.00
IUUC-Osa-085348	Oryza sativa	75.44	8.00e-146	509.00
IUUC-Pop-099449	Populus trichocarpa	44.85	6.00e-74	271.00
IUUC-Ppe-101557	Prunus persica	49.56	7.00e-83	300.00
IUUC-Sha-106792	Sarcophilus harrisii	40.86	1.00e-14	74.70
IUUC-Sit-109852	Setaria italica	83.54	0.00e+00	625.00
IUUC-Sly-111133	Solanum lycopersicum	44.37	2.00e-75	275.00
IUUC-Stu-112868	Solanum tuberosum	41.84	1.00e-72	266.00
IUUC-Sbi-114435	Sorghum bicolor	87.65	0.00e+00	637.00
IUUC-Tgu-117205	Taeniopygia guttata	40.86	1.00e-14	74.30
IUUC-Tca-121042	Theobroma cacao	49.13	2.00e-77	282.00
IUUC-Tae-124510	Triticum aestivum	67.43	7.00e-131	459.00
IUUC-Tur-126047	Triticum urartu	66.57	2.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence