iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114633

Ensembl Protein ID

Sb05g002930.1

UniProt Accession

A0A1B6PPY4; A0A1B6PPY4_SORBI

Genbank Protein ID

KXG27729.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G034700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g002930	Sb05g002930.1	Sb05g002930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-09	38.9	642	684

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +Cg  g     lv+C+ C  ++H +C + + +  lp  + w+Cp+C 
   Q: 642  CRICGMDGT----LVCCDGCPWAYHSRCIGQN-KAFLPHGD-WFCPECV 684
           99**99999....*******************.*******7.******6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAAGGVKTE TAGGAEAQEP AAVSAAGEAE PGGGGPGHAG DAVAEASASV PTAEATQVGG 60
GAAADTAGGN LSAVPEADGD GGAGVGRDAV RAASEVVVAL GGIAGGSRGV DPAVAQAKMV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCCG CTGGTGGCGT GAAGACGGAG ACCGCCGGTG GGGCGGAAGC GCAAGAGCCT 60
GCTGCGGTAA GCGCGGCCGG TGAGGCCGAG CCGGGTGGAG GCGGTCCGGG ACATGCGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	65.76	0.00e+00	2172.00
IUUC-Atr-002497	Amborella trichopoda	34.13	0.00e+00	670.00
IUUC-Aly-006239	Arabidopsis lyrata	34.09	2.00e-145	509.00
IUUC-Ath-007130	Arabidopsis thaliana	31.87	1.00e-132	467.00
IUUC-Bgr-012025	Blumeria graminis	33.33	7.00e-09	55.80
IUUC-Bdi-014067	Brachypodium distachyon	61.41	0.00e+00	2115.00
IUUC-Bol-016165	Brassica oleracea	33.24	3.00e-132	466.00
IUUC-Bra-017694	Brassica rapa	32.93	1.00e-128	453.00
IUUC-Cel-018283	Caenorhabditis elegans	23.81	3.00e-14	74.70
IUUC-Hvu-047397	Hordeum vulgare	64.19	0.00e+00	2129.00
IUUC-Mtr-058339	Medicago truncatula	35.76	2.00e-103	370.00
IUUC-Oba-075125	Oryza barthii	64.87	0.00e+00	2179.00
IUUC-Obr-076575	Oryza brachyantha	67.73	0.00e+00	2174.00
IUUC-Ogl-077936	Oryza glaberrima	64.82	0.00e+00	2174.00
IUUC-Ogu-078676	Oryza glumaepatula	64.82	0.00e+00	2172.00
IUUC-Opu-083405	Oryza punctata	65.03	0.00e+00	2175.00
IUUC-Oru-084745	Oryza rufipogon	64.82	0.00e+00	2177.00
IUUC-Smo-109246	Selaginella moellendorffii	38.59	4.00e-61	229.00
IUUC-Sly-111813	Solanum lycopersicum	33.65	1.00e-135	477.00
IUUC-Tca-121553	Theobroma cacao	35.29	0.00e+00	890.00
IUUC-Tae-125025	Triticum aestivum	65.11	0.00e+00	2142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence