iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006305

UUCD1 version

UUC-ArL-00884

Ensembl Protein ID

fgenesh1_pm.C_scaffold_5001620

UniProt Accession

D7LV53; D7LV53_ARALL

Genbank Protein ID

EFH54296.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348717

Gene Name

SDIR1; ARALYDRAFT_324076

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_5001620	fgenesh1_pm.C_scaffold_5001620	fgenesh1_pm.C_scaffold_5001620

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-08	34.5	210	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle     + +++lpC H+fha C+  w       +++ +CP+C+
   Q: 210  CSVCLEQVtvGEIVRTLPCLHQFHAGCIDPW------LRQQGTCPVCK 251
           9*****9966444******************......**********7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSFVFRGSRG DLESGFSGFI PERRAMRVHG ARPVNSNSLA FLVTVLLLFM ILNSHQMPPN 60
FLLWLVLGVF LMATTLRMYA TCQQLQAQAQ AHAAAASGLF SHTELRLHVP PSIALATRGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTTG TTTTCCGGGG AAGTAGAGGA GATTTAGAAA GCGGATTCTC GGGTTTTATA 60
CCCGAAAGGC GAGCTATGGT ATGCTTCTTC TTGACAGTTT TTCAATATAG GAAACATATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0043231--C:intracellular membrane-bounded organelle
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009789--P:positive regulation of abscisic acid-activated signaling pathway
GO:0009737--P:response to abscisic acid
GO:0009651--P:response to salt stress
GO:0009414--P:response to water deprivation

KEGG

aly:ARALYDRAFT_324076

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	54.79	4.00e-62	231.00
IUUC-Atr-002651	Amborella trichopoda	68.15	6.00e-79	286.00
IUUC-Ath-007026	Arabidopsis thaliana	96.70	4.00e-135	473.00
IUUC-Bdi-015038	Brachypodium distachyon	65.37	2.00e-74	271.00
IUUC-Bol-015365	Brassica oleracea	92.02	2.00e-115	407.00
IUUC-Bra-017904	Brassica rapa	94.66	7.00e-116	409.00
IUUC-Cja-018949	Callithrix jacchus	50.00	5.00e-10	57.00
IUUC-Cre-022982	Chlamydomonas reinhardtii	62.00	1.00e-14	73.20
IUUC-Cme-027166	Cyanidioschyzon merolae	46.25	6.00e-14	69.70
IUUC-Fox-038011	Fusarium oxysporum	48.61	3.00e-15	75.90
IUUC-Fso-038141	Fusarium solani	45.65	7.00e-17	81.30
IUUC-Gma-044260	Glycine max	78.18	1.00e-97	348.00
IUUC-Hvu-047764	Hordeum vulgare	66.79	4.00e-64	237.00
IUUC-Lpe-051371	Leersia perrieri	66.90	3.00e-72	264.00
IUUC-Mtr-058078	Medicago truncatula	78.55	2.00e-98	350.00
IUUC-Mac-065081	Musa acuminata	70.49	2.00e-81	295.00
IUUC-Oba-075903	Oryza barthii	62.50	2.00e-28	117.00
IUUC-Obr-076184	Oryza brachyantha	60.69	9.00e-64	236.00
IUUC-Ogl-076965	Oryza glaberrima	67.72	2.00e-73	268.00
IUUC-Ogu-078414	Oryza glumaepatula	60.56	1.00e-59	221.00
IUUC-Oin-079430	Oryza indica	67.72	2.00e-73	268.00
IUUC-Olo-080739	Oryza longistaminata	67.37	5.00e-73	266.00
IUUC-Ome-081538	Oryza meridionalis	67.72	1.00e-73	268.00
IUUC-Oni-082633	Oryza nivara	67.72	1.00e-73	269.00
IUUC-Opu-084125	Oryza punctata	67.37	3.00e-72	264.00
IUUC-Oru-085061	Oryza rufipogon	60.56	1.00e-59	221.00
IUUC-Osa-086209	Oryza sativa	67.72	2.00e-73	268.00
IUUC-Ppa-095613	Physcomitrella patens	57.66	2.00e-55	207.00
IUUC-Pop-099435	Populus trichocarpa	79.27	2.00e-104	371.00
IUUC-Ppe-101792	Prunus persica	79.35	4.00e-101	360.00
IUUC-Smo-109389	Selaginella moellendorffii	62.65	2.00e-66	244.00
IUUC-Sit-110587	Setaria italica	79.69	1.00e-15	73.90
IUUC-Sly-111915	Solanum lycopersicum	75.00	2.00e-92	331.00
IUUC-Stu-112568	Solanum tuberosum	65.85	8.00e-77	281.00
IUUC-Sbi-113958	Sorghum bicolor	66.67	9.00e-75	272.00
IUUC-Tsy-118915	Tarsius syrichta	42.67	9.00e-14	69.70
IUUC-Tca-121397	Theobroma cacao	78.62	6.00e-103	366.00
IUUC-Tae-125370	Triticum aestivum	67.16	2.00e-63	234.00
IUUC-Tur-125977	Triticum urartu	62.50	3.00e-65	241.00
IUUC-Tbe-127906	Tupaia belangeri	42.67	2.00e-13	68.90
IUUC-Vvi-131326	Vitis vinifera	81.09	4.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence