iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080966

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539563.1_FG004	KN539563.1_FGT004	KN539563.1_FGP004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	7.00e-06	26.7	38	77

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 103  ldrlpeeilveilklldkeellraarvcrrwqelasqkal 142
           +  lpee+l e++ +l+ +++lr++  c++w+ + s++++
   Q: 38   GAVLPEEMLTEVFLRLPIKSILRFRAACHSWYAMLSSQEF 77
           678*****************************65554554 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MMRDSKRTRS APPREPLEMT EDMTPRSKRR KFVPFGEGAV LPEEMLTEVF LRLPIKSILR 60
FRAACHSWYA MLSSQEFCQL YITRTEAMPP QPKLLFISPT ANFNSTAVYT CSPSKPIDDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCGAG ACAGCAAGAG GACGAGGTCC GCACCACCCA GAGAACCACT GGAAATGACA 60
GAGGACATGA CCCCAAGAAG CAAGAGGAGG AAATTTGTAC CATTCGGAGA AGGTGCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000127	Aegilops tauschii	48.68	5.00e-135	474.00
IUUC-Cel-018409	Caenorhabditis elegans	34.15	2.10e-02	32.70
IUUC-Cne-026987	Cryptococcus neoformans	70.59	6.30e-01	29.30
IUUC-Lpe-051032	Leersia perrieri	62.19	0.00e+00	1025.00
IUUC-Oba-075410	Oryza barthii	70.06	0.00e+00	1154.00
IUUC-Ogl-077729	Oryza glaberrima	70.06	0.00e+00	1154.00
IUUC-Ogu-077953	Oryza glumaepatula	69.83	0.00e+00	1152.00
IUUC-Oin-079638	Oryza indica	67.36	1.00e-61	228.00
IUUC-Ome-081396	Oryza meridionalis	27.80	3.00e-26	111.00
IUUC-Oni-082495	Oryza nivara	70.06	0.00e+00	1154.00
IUUC-Oru-084884	Oryza rufipogon	70.06	0.00e+00	1154.00
IUUC-Osa-085690	Oryza sativa	70.06	0.00e+00	1154.00
IUUC-Ppa-095844	Physcomitrella patens	27.03	1.00e-03	37.40
IUUC-Pva-103073	Pteropus vampyrus	32.73	3.00e-03	34.70
IUUC-Sit-109871	Setaria italica	56.38	0.00e+00	945.00
IUUC-Sbi-113893	Sorghum bicolor	52.58	0.00e+00	838.00
IUUC-Tca-121543	Theobroma cacao	21.02	6.00e-19	88.60
IUUC-Tvi-122433	Trichoderma virens	27.08	1.50e-01	30.00
IUUC-Tae-124805	Triticum aestivum	47.27	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence