iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113777

UUCD1 version

UUC-SoB-00274

Ensembl Protein ID

Sb01g047160.1

UniProt Accession

C5WXZ2; C5WXZ2_SORBI

Genbank Protein ID

EER95510.1; KXG40188.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760; CM000760

Gene Name

SORBI_001G505300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g047160	Sb01g047160.1	Sb01g047160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-06	28.7	148	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl...vlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++C e ++d ++   vl CgH++h++Cl+ +      + ++f+CP+C
   Q: 148  CPVCIEYLFDSTKaisVLHCGHTIHLECLYEM-----RAHQQFSCPVC 190
           ******9977655222677**********555.....599******** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDADAGPERY GCVHYRRKCK IRAPCCGEVF DCRHCHNEAK DSLEVSIQDR HVVPRHDIKL 60
VICSLCNKEQ DVQQDCSNCG ACLGKYFCAK CNFFDDDVSK NQFHCDGCGI CRTGGAENFY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCTG ACGCCGGACC AGAGCGATAC GGGTAACCAC CATTTTCTCA TGGCCATGGC 60
TTAAGCTTCT CTCTTTCTCT GCGATCATTT TCTTGTCGGA ATAATCAAAC ACTCCCGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g047160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006141	Arabidopsis lyrata	64.50	2.00e-106	377.00
IUUC-Ath-007628	Arabidopsis thaliana	64.89	3.00e-107	380.00
IUUC-Bdi-014852	Brachypodium distachyon	75.28	4.00e-121	426.00
IUUC-Bol-016321	Brassica oleracea	66.02	2.00e-107	381.00
IUUC-Bra-018009	Brassica rapa	66.02	4.00e-107	380.00
IUUC-Cre-022565	Chlamydomonas reinhardtii	50.99	3.00e-74	270.00
IUUC-Gma-043022	Glycine max	67.59	6.00e-108	382.00
IUUC-Hvu-047256	Hordeum vulgare	76.89	2.00e-124	437.00
IUUC-Lpe-051493	Leersia perrieri	87.17	3.00e-139	486.00
IUUC-Mtr-058584	Medicago truncatula	65.10	3.00e-106	377.00
IUUC-Oba-075821	Oryza barthii	78.45	5.00e-135	473.00
IUUC-Obr-076397	Oryza brachyantha	86.04	7.00e-116	409.00
IUUC-Ogl-077866	Oryza glaberrima	78.17	3.00e-119	420.00
IUUC-Ogu-078001	Oryza glumaepatula	78.45	3.00e-135	473.00
IUUC-Oin-079627	Oryza indica	79.25	5.00e-137	480.00
IUUC-Olo-080982	Oryza longistaminata	87.39	5.00e-117	412.00
IUUC-Oni-082329	Oryza nivara	79.25	1.00e-136	478.00
IUUC-Opu-083170	Oryza punctata	83.57	2.00e-102	364.00
IUUC-Oru-085088	Oryza rufipogon	79.25	1.00e-136	478.00
IUUC-Ppa-095679	Physcomitrella patens	59.38	9.00e-96	342.00
IUUC-Pop-099303	Populus trichocarpa	68.99	3.00e-113	400.00
IUUC-Ppe-101606	Prunus persica	68.46	4.00e-111	393.00
IUUC-Sit-110156	Setaria italica	90.57	1.00e-143	500.00
IUUC-Stu-111990	Solanum tuberosum	68.06	5.00e-113	399.00
IUUC-Tca-121698	Theobroma cacao	68.06	1.00e-111	395.00
IUUC-Tae-124038	Triticum aestivum	76.89	2.00e-124	437.00
IUUC-Vvi-131666	Vitis vinifera	70.77	9.00e-115	405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence