iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080527

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540617.1_FG003	KN540617.1_FGT003	KN540617.1_FGP003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-11	45.4	145	184
E3 activity/RING/U-box	1.80e-10	41.3	143	190

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  +++ p+++pCgH f+++C+ +w      ++++  C++Cr
   Q: 145  CSFCMLLPER-PVTTPCGHNFCLKCFRRW-----IENGKRACVICR 184
           9***9999**.9*****************.....6999999****8 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
            +C+  + l++ Pv++p+G+ +  ++ ++w+++g++ c ++r+p+t++
   Q: 143  INCSFCMLLPERPVTTPCGHNFCLKCFRRWIENGKRACVICRAPITQK 190
           67999999************************************9865 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MASSSNPSNL PCSSDGVCMV CKVLTAEVEQ LRCSTCATPW HTPCLSSTPP LTDVAHWVCP 60
DCSGDVTASY LPSDVARPES SLIAAIRVIE ADPVLSIQEK ARRRQELLGH AGDAGAARTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGT CATCAAACCC ATCAAATCTT CCCTGCTCTA GTGATGGTGT ATGCATGGTA 60
TGCAAGGTGC TTACAGCAGA GGTAGAGCAG CTGCGTTGTA GCACCTGTGC GACGCCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002603	Amborella trichopoda	56.67	0.00e+00	683.00
IUUC-Apl-003819	Anas platyrhynchos	44.79	7.00e-36	144.00
IUUC-Aca-005287	Anolis carolinensis	29.60	8.00e-36	144.00
IUUC-Aly-006276	Arabidopsis lyrata	56.77	0.00e+00	699.00
IUUC-Ath-006667	Arabidopsis thaliana	57.29	0.00e+00	685.00
IUUC-Acl-008377	Aspergillus clavatus	28.72	4.00e-08	51.60
IUUC-Bdi-014586	Brachypodium distachyon	63.33	0.00e+00	750.00
IUUC-Bol-015519	Brassica oleracea	58.42	0.00e+00	708.00
IUUC-Bra-017110	Brassica rapa	58.25	0.00e+00	709.00
IUUC-Cel-018714	Caenorhabditis elegans	33.33	2.00e-06	45.40
IUUC-Cpo-022125	Cavia porcellus	30.86	8.00e-41	161.00
IUUC-Cre-022645	Chlamydomonas reinhardtii	33.79	6.00e-72	264.00
IUUC-Cin-025454	Ciona intestinalis	44.21	2.00e-28	120.00
IUUC-Cne-026942	Cryptococcus neoformans	46.67	2.00e-28	117.00
IUUC-Fal-037550	Ficedula albicollis	33.71	4.00e-38	152.00
IUUC-Gga-040484	Gallus gallus	44.79	1.00e-35	144.00
IUUC-Gma-044194	Glycine max	57.93	0.00e+00	674.00
IUUC-Hsa-046236	Homo sapiens	43.46	2.00e-35	143.00
IUUC-Laf-053671	Loxodonta africana	42.93	8.00e-34	138.00
IUUC-Meu-056189	Macropus eugenii	50.82	2.00e-26	113.00
IUUC-Mpo-057318	Magnaporthe poae	33.33	3.00e-08	52.80
IUUC-Mtr-058805	Medicago truncatula	56.93	0.00e+00	669.00
IUUC-Mla-058836	Melampsora laricipopulina	53.79	2.00e-39	155.00
IUUC-Mga-059759	Meleagris gallopavo	44.79	6.00e-36	144.00
IUUC-Mvi-060378	Microbotryum violaceum	56.76	9.00e-32	130.00
IUUC-Mac-064697	Musa acuminata	59.05	0.00e+00	729.00
IUUC-Ncr-068942	Neurospora crassa	26.32	3.00e-06	45.80
IUUC-Oba-075780	Oryza barthii	96.25	0.00e+00	1347.00
IUUC-Ogl-077900	Oryza glaberrima	96.69	0.00e+00	976.00
IUUC-Ogu-078616	Oryza glumaepatula	96.40	0.00e+00	1347.00
IUUC-Oin-079143	Oryza indica	96.25	0.00e+00	1340.00
IUUC-Oni-082510	Oryza nivara	90.27	0.00e+00	1262.00
IUUC-Oru-084985	Oryza rufipogon	94.36	0.00e+00	1332.00
IUUC-Psi-093033	Pelodiscus sinensis	30.07	2.00e-37	150.00
IUUC-Ppa-095940	Physcomitrella patens	51.00	0.00e+00	648.00
IUUC-Pop-099561	Populus trichocarpa	59.33	0.00e+00	703.00
IUUC-Ppe-101961	Prunus persica	56.95	0.00e+00	679.00
IUUC-Pva-102266	Pteropus vampyrus	28.65	8.00e-33	134.00
IUUC-Pgr-103644	Puccinia graminis	55.17	3.00e-39	155.00
IUUC-Sha-106618	Sarcophilus harrisii	44.50	6.00e-35	142.00
IUUC-Smo-109319	Selaginella moellendorffii	47.39	2.00e-153	535.00
IUUC-Sit-110588	Setaria italica	59.85	0.00e+00	776.00
IUUC-Sly-111415	Solanum lycopersicum	55.69	0.00e+00	689.00
IUUC-Stu-112842	Solanum tuberosum	54.39	0.00e+00	691.00
IUUC-Sbi-114726	Sorghum bicolor	60.25	0.00e+00	766.00
IUUC-Sre-115182	Sporisorium reilianum	43.41	1.00e-29	122.00
IUUC-Tgu-116538	Taeniopygia guttata	44.79	2.00e-35	143.00
IUUC-Tru-117599	Takifugu rubripes	42.23	7.00e-35	141.00
IUUC-Tni-119843	Tetraodon nigroviridis	32.43	6.00e-41	161.00
IUUC-Tca-121785	Theobroma cacao	57.17	0.00e+00	705.00
IUUC-Tae-125473	Triticum aestivum	60.83	0.00e+00	680.00
IUUC-Tme-127149	Tuber melanosporum	48.15	4.00e-23	101.00
IUUC-Vvi-131413	Vitis vinifera	56.69	0.00e+00	702.00
IUUC-Xtr-132432	Xenopus tropicalis	44.50	7.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence